Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHGC3Q9UN70 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGC3Q9UN70 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PCDHGC3Q9UN70 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHGC3Q9UN70 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGC3Q9UN70 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGC3Q9UN70 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGC3Q9UN70 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHGC3Q9UN70 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHGC3Q9UN70 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHGC3Q9UN70 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHGC3Q9UN70 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHGC3Q9UN70 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHGC3Q9UN70 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHGC3Q9UN70 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHGC3Q9UN70 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 AL121603.2-201ENST00000557373 2117 ntBASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 AL137784.2-201ENST00000607332 1000 ntBASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 AP005212.1-201ENST00000581547 1997 ntBASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PCDHGC3Q9UN70 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGC3Q9UN70 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGC3Q9UN70 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHGC3Q9UN70 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGC3Q9UN70 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHGC3Q9UN70 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGC3Q9UN70 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
PCDHGC3Q9UN70 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGC3Q9UN70 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PCDHGC3Q9UN70 AC007322.1-201ENST00000426983 750 ntBASIC21.71■■□□□ 1.07
PCDHGC3Q9UN70 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDHGC3Q9UN70 RARRES2P4-201ENST00000514074 484 ntBASIC21.71■■□□□ 1.07
PCDHGC3Q9UN70 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHGC3Q9UN70 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHGC3Q9UN70 AC080038.1-201ENST00000611274 1154 ntBASIC21.71■■□□□ 1.07
PCDHGC3Q9UN70 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
PCDHGC3Q9UN70 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGC3Q9UN70 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGC3Q9UN70 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGC3Q9UN70 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHGC3Q9UN70 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PCDHGC3Q9UN70 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
PCDHGC3Q9UN70 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PCDHGC3Q9UN70 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHGC3Q9UN70 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGC3Q9UN70 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGC3Q9UN70 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGC3Q9UN70 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PCDHGC3Q9UN70 AC004911.1-201ENST00000416316 871 ntBASIC21.7■■□□□ 1.06
PCDHGC3Q9UN70 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHGC3Q9UN70 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHGC3Q9UN70 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PCDHGC3Q9UN70 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.7■■□□□ 1.06
PCDHGC3Q9UN70 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PCDHGC3Q9UN70 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PCDHGC3Q9UN70 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGC3Q9UN70 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGC3Q9UN70 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHGC3Q9UN70 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PCDHGC3Q9UN70 AC073314.1-201ENST00000568729 2216 ntBASIC21.7■■□□□ 1.06
PCDHGC3Q9UN70 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms