Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.82■□□□□ 0.12
NOTCH3Q9UM47 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
NOTCH3Q9UM47 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NOTCH3Q9UM47 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.81■□□□□ 0.12
NOTCH3Q9UM47 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NOTCH3Q9UM47 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NOTCH3Q9UM47 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.81■□□□□ 0.12
NOTCH3Q9UM47 C11orf96-202ENST00000528572 1834 ntBASIC15.81■□□□□ 0.12
NOTCH3Q9UM47 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NOTCH3Q9UM47 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NOTCH3Q9UM47 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NOTCH3Q9UM47 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NOTCH3Q9UM47 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NOTCH3Q9UM47 MIR4497-201ENST00000583208 89 ntBASIC15.81■□□□□ 0.12
NOTCH3Q9UM47 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.81■□□□□ 0.12
NOTCH3Q9UM47 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.81■□□□□ 0.12
NOTCH3Q9UM47 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.81■□□□□ 0.12
NOTCH3Q9UM47 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NOTCH3Q9UM47 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NOTCH3Q9UM47 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 LSM12P1-201ENST00000411836 588 ntBASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 ABHD17AP6-201ENST00000458502 1044 ntBASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 AL589743.5-201ENST00000616611 1050 ntBASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 AC100791.3-201ENST00000617619 330 ntBASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 AC073912.3-201ENST00000624414 853 ntBASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 AC120498.9-201ENST00000339021 3867 ntBASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 AC008403.3-201ENST00000598924 454 ntBASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 Z99916.2-201ENST00000604037 246 ntBASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NOTCH3Q9UM47 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 AC026471.6-201ENST00000622954 1905 ntBASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 PNMA6B-201ENST00000538162 1200 ntBASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
NOTCH3Q9UM47 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NOTCH3Q9UM47 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms