Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
DUX4Q9UBX2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.96■□□□□ 0.47
DUX4Q9UBX2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.96■□□□□ 0.47
DUX4Q9UBX2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DUX4Q9UBX2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.96■□□□□ 0.47
DUX4Q9UBX2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUX4Q9UBX2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DUX4Q9UBX2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUX4Q9UBX2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.96■□□□□ 0.47
DUX4Q9UBX2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.96■□□□□ 0.47
DUX4Q9UBX2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DUX4Q9UBX2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUX4Q9UBX2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUX4Q9UBX2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUX4Q9UBX2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUX4Q9UBX2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
DUX4Q9UBX2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.96■□□□□ 0.47
DUX4Q9UBX2 AP004607.7-201ENST00000527152 1677 ntBASIC17.96■□□□□ 0.47
DUX4Q9UBX2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
DUX4Q9UBX2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
DUX4Q9UBX2 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
DUX4Q9UBX2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.46
DUX4Q9UBX2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.95■□□□□ 0.46
DUX4Q9UBX2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 AL354811.1-201ENST00000610286 706 ntBASIC17.95■□□□□ 0.46
DUX4Q9UBX2 AL358852.1-201ENST00000623174 1268 ntBASIC17.95■□□□□ 0.46
DUX4Q9UBX2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.95■□□□□ 0.46
DUX4Q9UBX2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 AC026471.6-201ENST00000622954 1905 ntBASIC17.94■□□□□ 0.46
DUX4Q9UBX2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
DUX4Q9UBX2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
DUX4Q9UBX2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.93■□□□□ 0.46
DUX4Q9UBX2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.93■□□□□ 0.46
DUX4Q9UBX2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DUX4Q9UBX2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DUX4Q9UBX2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
DUX4Q9UBX2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.93■□□□□ 0.46
DUX4Q9UBX2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.93■□□□□ 0.46
DUX4Q9UBX2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DUX4Q9UBX2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.93■□□□□ 0.46
DUX4Q9UBX2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.93■□□□□ 0.46
DUX4Q9UBX2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
DUX4Q9UBX2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.93■□□□□ 0.46
DUX4Q9UBX2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DUX4Q9UBX2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
DUX4Q9UBX2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
DUX4Q9UBX2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.93■□□□□ 0.46
DUX4Q9UBX2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
DUX4Q9UBX2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
DUX4Q9UBX2 BX005040.4-201ENST00000637145 1518 ntBASIC17.93■□□□□ 0.46
DUX4Q9UBX2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DUX4Q9UBX2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
DUX4Q9UBX2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
DUX4Q9UBX2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DUX4Q9UBX2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
DUX4Q9UBX2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
DUX4Q9UBX2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
DUX4Q9UBX2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms