Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.97■■□□□ 1.11
CISHQ9NSE2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CISHQ9NSE2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CISHQ9NSE2 AC027702.1-201ENST00000563810 1770 ntBASIC21.97■■□□□ 1.11
CISHQ9NSE2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CISHQ9NSE2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
CISHQ9NSE2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CISHQ9NSE2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CISHQ9NSE2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CISHQ9NSE2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CISHQ9NSE2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.96■■□□□ 1.11
CISHQ9NSE2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CISHQ9NSE2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.96■■□□□ 1.11
CISHQ9NSE2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.96■■□□□ 1.11
CISHQ9NSE2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CISHQ9NSE2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CISHQ9NSE2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.96■■□□□ 1.11
CISHQ9NSE2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.96■■□□□ 1.11
CISHQ9NSE2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CISHQ9NSE2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CISHQ9NSE2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CISHQ9NSE2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.96■■□□□ 1.11
CISHQ9NSE2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CISHQ9NSE2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CISHQ9NSE2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CISHQ9NSE2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.95■■□□□ 1.1
CISHQ9NSE2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CISHQ9NSE2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.95■■□□□ 1.1
CISHQ9NSE2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.95■■□□□ 1.1
CISHQ9NSE2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CISHQ9NSE2 AL050303.2-201ENST00000619798 666 ntBASIC21.95■■□□□ 1.1
CISHQ9NSE2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CISHQ9NSE2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CISHQ9NSE2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CISHQ9NSE2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CISHQ9NSE2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CISHQ9NSE2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CISHQ9NSE2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CISHQ9NSE2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.95■■□□□ 1.1
CISHQ9NSE2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CISHQ9NSE2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CISHQ9NSE2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CISHQ9NSE2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.94■■□□□ 1.1
CISHQ9NSE2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CISHQ9NSE2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
CISHQ9NSE2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CISHQ9NSE2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CISHQ9NSE2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CISHQ9NSE2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CISHQ9NSE2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CISHQ9NSE2 MIR663A-201ENST00000385250 93 ntBASIC21.94■■□□□ 1.1
CISHQ9NSE2 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.94■■□□□ 1.1
CISHQ9NSE2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CISHQ9NSE2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
CISHQ9NSE2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CISHQ9NSE2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.94■■□□□ 1.1
CISHQ9NSE2 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CISHQ9NSE2 AC069236.1-201ENST00000604339 616 ntBASIC21.94■■□□□ 1.1
CISHQ9NSE2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CISHQ9NSE2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.94■■□□□ 1.1
CISHQ9NSE2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CISHQ9NSE2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CISHQ9NSE2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CISHQ9NSE2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CISHQ9NSE2 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CISHQ9NSE2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CISHQ9NSE2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CISHQ9NSE2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CISHQ9NSE2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CISHQ9NSE2 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CISHQ9NSE2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CISHQ9NSE2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.93■■□□□ 1.1
CISHQ9NSE2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CISHQ9NSE2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.93■■□□□ 1.1
CISHQ9NSE2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CISHQ9NSE2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.93■■□□□ 1.1
CISHQ9NSE2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.93■■□□□ 1.1
CISHQ9NSE2 AC008694.1-202ENST00000636953 945 ntBASIC21.93■■□□□ 1.1
CISHQ9NSE2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CISHQ9NSE2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CISHQ9NSE2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CISHQ9NSE2 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
CISHQ9NSE2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CISHQ9NSE2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CISHQ9NSE2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.92■■□□□ 1.1
CISHQ9NSE2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CISHQ9NSE2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CISHQ9NSE2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.92■■□□□ 1.1
CISHQ9NSE2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CISHQ9NSE2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.92■■□□□ 1.1
CISHQ9NSE2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.92■■□□□ 1.1
CISHQ9NSE2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CISHQ9NSE2 OR10C1-204ENST00000622521 1039 ntBASIC21.92■■□□□ 1.1
CISHQ9NSE2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CISHQ9NSE2 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CISHQ9NSE2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.92■■□□□ 1.1
CISHQ9NSE2 AC007225.1-201ENST00000566331 1836 ntBASIC21.92■■□□□ 1.1
CISHQ9NSE2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.91■■□□□ 1.1
CISHQ9NSE2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CISHQ9NSE2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms