Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VPS45Q9NRW7 AL049796.1-201ENST00000565336 1766 ntBASIC21.22■□□□□ 0.99
VPS45Q9NRW7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
VPS45Q9NRW7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VPS45Q9NRW7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VPS45Q9NRW7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
VPS45Q9NRW7 AL137060.1-201ENST00000618151 2648 ntBASIC21.22■□□□□ 0.99
VPS45Q9NRW7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.22■□□□□ 0.99
VPS45Q9NRW7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
VPS45Q9NRW7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.21■□□□□ 0.99
VPS45Q9NRW7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS45Q9NRW7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS45Q9NRW7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
VPS45Q9NRW7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.21■□□□□ 0.99
VPS45Q9NRW7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
VPS45Q9NRW7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.21■□□□□ 0.99
VPS45Q9NRW7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
VPS45Q9NRW7 AC069236.1-201ENST00000604339 616 ntBASIC21.21■□□□□ 0.99
VPS45Q9NRW7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.21■□□□□ 0.99
VPS45Q9NRW7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.21■□□□□ 0.99
VPS45Q9NRW7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.21■□□□□ 0.99
VPS45Q9NRW7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS45Q9NRW7 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.21■□□□□ 0.99
VPS45Q9NRW7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS45Q9NRW7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VPS45Q9NRW7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS45Q9NRW7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS45Q9NRW7 AC061975.6-201ENST00000579045 1553 ntBASIC21.2■□□□□ 0.98
VPS45Q9NRW7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.2■□□□□ 0.98
VPS45Q9NRW7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS45Q9NRW7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
VPS45Q9NRW7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.2■□□□□ 0.98
VPS45Q9NRW7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.2■□□□□ 0.98
VPS45Q9NRW7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VPS45Q9NRW7 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.2■□□□□ 0.98
VPS45Q9NRW7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.2■□□□□ 0.98
VPS45Q9NRW7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.2■□□□□ 0.98
VPS45Q9NRW7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
VPS45Q9NRW7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.2■□□□□ 0.98
VPS45Q9NRW7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS45Q9NRW7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VPS45Q9NRW7 AC005229.4-201ENST00000610085 2198 ntBASIC21.2■□□□□ 0.98
VPS45Q9NRW7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
VPS45Q9NRW7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS45Q9NRW7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS45Q9NRW7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS45Q9NRW7 RPS2P4-201ENST00000476944 856 ntBASIC21.19■□□□□ 0.98
VPS45Q9NRW7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.19■□□□□ 0.98
VPS45Q9NRW7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.19■□□□□ 0.98
VPS45Q9NRW7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.19■□□□□ 0.98
VPS45Q9NRW7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.19■□□□□ 0.98
VPS45Q9NRW7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.19■□□□□ 0.98
VPS45Q9NRW7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VPS45Q9NRW7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
VPS45Q9NRW7 KRT16P2-201ENST00000414673 1423 ntBASIC21.19■□□□□ 0.98
VPS45Q9NRW7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS45Q9NRW7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VPS45Q9NRW7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.19■□□□□ 0.98
VPS45Q9NRW7 AF106564.1-201ENST00000607058 2553 ntBASIC21.18■□□□□ 0.98
VPS45Q9NRW7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS45Q9NRW7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS45Q9NRW7 AL596275.1-201ENST00000423464 877 ntBASIC21.18■□□□□ 0.98
VPS45Q9NRW7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.18■□□□□ 0.98
VPS45Q9NRW7 AL158047.1-201ENST00000445918 881 ntBASIC21.18■□□□□ 0.98
VPS45Q9NRW7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.18■□□□□ 0.98
VPS45Q9NRW7 AC097658.1-201ENST00000475555 843 ntBASIC21.18■□□□□ 0.98
VPS45Q9NRW7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.18■□□□□ 0.98
VPS45Q9NRW7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS45Q9NRW7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.18■□□□□ 0.98
VPS45Q9NRW7 AC142381.4-202ENST00000563973 229 ntBASIC21.18■□□□□ 0.98
VPS45Q9NRW7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.18■□□□□ 0.98
VPS45Q9NRW7 AC120498.10-201ENST00000621827 505 ntBASIC21.18■□□□□ 0.98
VPS45Q9NRW7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VPS45Q9NRW7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
VPS45Q9NRW7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.18■□□□□ 0.98
VPS45Q9NRW7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
VPS45Q9NRW7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.18■□□□□ 0.98
VPS45Q9NRW7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS45Q9NRW7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS45Q9NRW7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
VPS45Q9NRW7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
VPS45Q9NRW7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VPS45Q9NRW7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
VPS45Q9NRW7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
VPS45Q9NRW7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS45Q9NRW7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS45Q9NRW7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS45Q9NRW7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS45Q9NRW7 BX276092.2-201ENST00000417668 665 ntBASIC21.17■□□□□ 0.98
VPS45Q9NRW7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VPS45Q9NRW7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
VPS45Q9NRW7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.17■□□□□ 0.98
VPS45Q9NRW7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS45Q9NRW7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VPS45Q9NRW7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS45Q9NRW7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
VPS45Q9NRW7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
VPS45Q9NRW7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VPS45Q9NRW7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.17■□□□□ 0.98
VPS45Q9NRW7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms