Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42SE2Q9NRR3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42SE2Q9NRR3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDC42SE2Q9NRR3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.16□□□□□ -0.14
CDC42SE2Q9NRR3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42SE2Q9NRR3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.16□□□□□ -0.14
CDC42SE2Q9NRR3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDC42SE2Q9NRR3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CDC42SE2Q9NRR3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 AC112907.3-201ENST00000577781 2400 ntBASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 AC099778.1-201ENST00000568593 1911 ntBASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 AC007952.6-201ENST00000573168 2673 ntBASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 AC003957.1-201ENST00000625108 2673 ntBASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CDC42SE2Q9NRR3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.15□□□□□ -0.15
CDC42SE2Q9NRR3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CDC42SE2Q9NRR3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
CDC42SE2Q9NRR3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.14□□□□□ -0.15
CDC42SE2Q9NRR3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 POU5F1P4-201ENST00000413175 1085 ntBASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 AC008175.2-201ENST00000612840 297 ntBASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 AC092720.2-201ENST00000602388 1665 ntBASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.13□□□□□ -0.15
CDC42SE2Q9NRR3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC14.12□□□□□ -0.15
CDC42SE2Q9NRR3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.12□□□□□ -0.15
CDC42SE2Q9NRR3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42SE2Q9NRR3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42SE2Q9NRR3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42SE2Q9NRR3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC42SE2Q9NRR3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.12□□□□□ -0.15
CDC42SE2Q9NRR3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms