Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDLIM7Q9NR12 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDLIM7Q9NR12 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDLIM7Q9NR12 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
PDLIM7Q9NR12 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDLIM7Q9NR12 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.17■■□□□ 1.3
PDLIM7Q9NR12 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.17■■□□□ 1.3
PDLIM7Q9NR12 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.17■■□□□ 1.3
PDLIM7Q9NR12 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.17■■□□□ 1.3
PDLIM7Q9NR12 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDLIM7Q9NR12 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PDLIM7Q9NR12 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PDLIM7Q9NR12 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
PDLIM7Q9NR12 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.17■■□□□ 1.3
PDLIM7Q9NR12 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM7Q9NR12 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM7Q9NR12 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM7Q9NR12 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.16■■□□□ 1.3
PDLIM7Q9NR12 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM7Q9NR12 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM7Q9NR12 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM7Q9NR12 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM7Q9NR12 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM7Q9NR12 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
PDLIM7Q9NR12 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM7Q9NR12 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC23.16■■□□□ 1.3
PDLIM7Q9NR12 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM7Q9NR12 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM7Q9NR12 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM7Q9NR12 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.16■■□□□ 1.3
PDLIM7Q9NR12 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PDLIM7Q9NR12 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.16■■□□□ 1.3
PDLIM7Q9NR12 AC079834.2-201ENST00000609776 1949 ntBASIC23.16■■□□□ 1.3
PDLIM7Q9NR12 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDLIM7Q9NR12 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.15■■□□□ 1.3
PDLIM7Q9NR12 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDLIM7Q9NR12 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PDLIM7Q9NR12 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
PDLIM7Q9NR12 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PDLIM7Q9NR12 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.15■■□□□ 1.3
PDLIM7Q9NR12 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.15■■□□□ 1.3
PDLIM7Q9NR12 KRT18P21-201ENST00000515767 1272 ntBASIC23.15■■□□□ 1.3
PDLIM7Q9NR12 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PDLIM7Q9NR12 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PDLIM7Q9NR12 FAM21FP-204ENST00000608637 956 ntBASIC23.15■■□□□ 1.3
PDLIM7Q9NR12 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
PDLIM7Q9NR12 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PDLIM7Q9NR12 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
PDLIM7Q9NR12 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.14■■□□□ 1.3
PDLIM7Q9NR12 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PDLIM7Q9NR12 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
PDLIM7Q9NR12 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
PDLIM7Q9NR12 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.14■■□□□ 1.29
PDLIM7Q9NR12 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDLIM7Q9NR12 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
PDLIM7Q9NR12 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.14■■□□□ 1.29
PDLIM7Q9NR12 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDLIM7Q9NR12 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.14■■□□□ 1.29
PDLIM7Q9NR12 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
PDLIM7Q9NR12 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.14■■□□□ 1.29
PDLIM7Q9NR12 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDLIM7Q9NR12 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC23.14■■□□□ 1.29
PDLIM7Q9NR12 AC069544.1-201ENST00000609399 999 ntBASIC23.14■■□□□ 1.29
PDLIM7Q9NR12 AC100791.3-201ENST00000617619 330 ntBASIC23.14■■□□□ 1.29
PDLIM7Q9NR12 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.14■■□□□ 1.29
PDLIM7Q9NR12 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PDLIM7Q9NR12 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDLIM7Q9NR12 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
PDLIM7Q9NR12 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PDLIM7Q9NR12 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PDLIM7Q9NR12 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDLIM7Q9NR12 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PDLIM7Q9NR12 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PDLIM7Q9NR12 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDLIM7Q9NR12 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.13■■□□□ 1.29
PDLIM7Q9NR12 AC092368.3-202ENST00000574180 1591 ntBASIC23.13■■□□□ 1.29
PDLIM7Q9NR12 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.13■■□□□ 1.29
PDLIM7Q9NR12 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDLIM7Q9NR12 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDLIM7Q9NR12 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.12■■□□□ 1.29
PDLIM7Q9NR12 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDLIM7Q9NR12 AC091799.1-201ENST00000422823 811 ntBASIC23.12■■□□□ 1.29
PDLIM7Q9NR12 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.12■■□□□ 1.29
PDLIM7Q9NR12 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.12■■□□□ 1.29
PDLIM7Q9NR12 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PDLIM7Q9NR12 BX088651.1-201ENST00000540551 451 ntBASIC23.12■■□□□ 1.29
PDLIM7Q9NR12 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PDLIM7Q9NR12 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC23.12■■□□□ 1.29
PDLIM7Q9NR12 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.12■■□□□ 1.29
PDLIM7Q9NR12 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDLIM7Q9NR12 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.12■■□□□ 1.29
PDLIM7Q9NR12 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
PDLIM7Q9NR12 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDLIM7Q9NR12 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.11■■□□□ 1.29
PDLIM7Q9NR12 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDLIM7Q9NR12 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
PDLIM7Q9NR12 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDLIM7Q9NR12 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDLIM7Q9NR12 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDLIM7Q9NR12 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms