Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 DUSP5P2-201ENST00000426873 1033 ntBASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.59■■□□□ 1.05
CSNK1G1Q9HCP0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CSNK1G1Q9HCP0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1G1Q9HCP0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1G1Q9HCP0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1G1Q9HCP0 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1G1Q9HCP0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CSNK1G1Q9HCP0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.59■■□□□ 1.05
CSNK1G1Q9HCP0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.59■■□□□ 1.05
CSNK1G1Q9HCP0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.59■■□□□ 1.05
CSNK1G1Q9HCP0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1G1Q9HCP0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.59■■□□□ 1.05
CSNK1G1Q9HCP0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1G1Q9HCP0 AC105020.6-201ENST00000621523 1217 ntBASIC21.59■■□□□ 1.05
CSNK1G1Q9HCP0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1G1Q9HCP0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1G1Q9HCP0 PLK5-205ENST00000642079 1969 ntBASIC21.59■■□□□ 1.05
CSNK1G1Q9HCP0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.59■■□□□ 1.05
CSNK1G1Q9HCP0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
CSNK1G1Q9HCP0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CSNK1G1Q9HCP0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1G1Q9HCP0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1G1Q9HCP0 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1G1Q9HCP0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.58■■□□□ 1.05
CSNK1G1Q9HCP0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1G1Q9HCP0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1G1Q9HCP0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1G1Q9HCP0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.58■■□□□ 1.05
CSNK1G1Q9HCP0 PGM5P4-201ENST00000421970 445 ntBASIC21.58■■□□□ 1.05
CSNK1G1Q9HCP0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1G1Q9HCP0 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.58■■□□□ 1.05
CSNK1G1Q9HCP0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.58■■□□□ 1.05
CSNK1G1Q9HCP0 AC097658.1-201ENST00000475555 843 ntBASIC21.58■■□□□ 1.05
CSNK1G1Q9HCP0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.58■■□□□ 1.05
CSNK1G1Q9HCP0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.58■■□□□ 1.05
CSNK1G1Q9HCP0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.58■■□□□ 1.05
CSNK1G1Q9HCP0 AC083880.1-201ENST00000608266 535 ntBASIC21.58■■□□□ 1.05
CSNK1G1Q9HCP0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CSNK1G1Q9HCP0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CSNK1G1Q9HCP0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.58■■□□□ 1.04
CSNK1G1Q9HCP0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.58■■□□□ 1.04
CSNK1G1Q9HCP0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CSNK1G1Q9HCP0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.58■■□□□ 1.04
CSNK1G1Q9HCP0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CSNK1G1Q9HCP0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CSNK1G1Q9HCP0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CSNK1G1Q9HCP0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
CSNK1G1Q9HCP0 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.57■■□□□ 1.04
CSNK1G1Q9HCP0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CSNK1G1Q9HCP0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.57■■□□□ 1.04
CSNK1G1Q9HCP0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CSNK1G1Q9HCP0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.57■■□□□ 1.04
CSNK1G1Q9HCP0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CSNK1G1Q9HCP0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CSNK1G1Q9HCP0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
CSNK1G1Q9HCP0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CSNK1G1Q9HCP0 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CSNK1G1Q9HCP0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.56■■□□□ 1.04
CSNK1G1Q9HCP0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSNK1G1Q9HCP0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CSNK1G1Q9HCP0 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.56■■□□□ 1.04
CSNK1G1Q9HCP0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.56■■□□□ 1.04
CSNK1G1Q9HCP0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.56■■□□□ 1.04
CSNK1G1Q9HCP0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.56■■□□□ 1.04
CSNK1G1Q9HCP0 KRT18P6-201ENST00000555540 1265 ntBASIC21.56■■□□□ 1.04
CSNK1G1Q9HCP0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.56■■□□□ 1.04
CSNK1G1Q9HCP0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CSNK1G1Q9HCP0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.56■■□□□ 1.04
CSNK1G1Q9HCP0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
CSNK1G1Q9HCP0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSNK1G1Q9HCP0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CSNK1G1Q9HCP0 AC005229.4-201ENST00000610085 2198 ntBASIC21.55■■□□□ 1.04
CSNK1G1Q9HCP0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CSNK1G1Q9HCP0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.55■■□□□ 1.04
CSNK1G1Q9HCP0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSNK1G1Q9HCP0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CSNK1G1Q9HCP0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSNK1G1Q9HCP0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.55■■□□□ 1.04
CSNK1G1Q9HCP0 AL356652.1-201ENST00000615962 565 ntBASIC21.55■■□□□ 1.04
CSNK1G1Q9HCP0 MIR2861-201ENST00000636310 90 ntBASIC21.55■■□□□ 1.04
CSNK1G1Q9HCP0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CSNK1G1Q9HCP0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CSNK1G1Q9HCP0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CSNK1G1Q9HCP0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms