Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RPAP3Q9H6T3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RPAP3Q9H6T3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPAP3Q9H6T3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RPAP3Q9H6T3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RPAP3Q9H6T3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RPAP3Q9H6T3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RPAP3Q9H6T3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
RPAP3Q9H6T3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RPAP3Q9H6T3 ECEL1P1-201ENST00000373592 1742 ntBASIC23.79■■□□□ 1.4
RPAP3Q9H6T3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RPAP3Q9H6T3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
RPAP3Q9H6T3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RPAP3Q9H6T3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.79■■□□□ 1.4
RPAP3Q9H6T3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.79■■□□□ 1.4
RPAP3Q9H6T3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RPAP3Q9H6T3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RPAP3Q9H6T3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
RPAP3Q9H6T3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.79■■□□□ 1.4
RPAP3Q9H6T3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
RPAP3Q9H6T3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC23.78■■□□□ 1.4
RPAP3Q9H6T3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RPAP3Q9H6T3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RPAP3Q9H6T3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.78■■□□□ 1.4
RPAP3Q9H6T3 POM121L13P-201ENST00000422362 380 ntBASIC23.78■■□□□ 1.4
RPAP3Q9H6T3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RPAP3Q9H6T3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RPAP3Q9H6T3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
RPAP3Q9H6T3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.78■■□□□ 1.4
RPAP3Q9H6T3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RPAP3Q9H6T3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RPAP3Q9H6T3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RPAP3Q9H6T3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RPAP3Q9H6T3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC23.77■■□□□ 1.4
RPAP3Q9H6T3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.77■■□□□ 1.4
RPAP3Q9H6T3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RPAP3Q9H6T3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
RPAP3Q9H6T3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RPAP3Q9H6T3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RPAP3Q9H6T3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.77■■□□□ 1.4
RPAP3Q9H6T3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.77■■□□□ 1.4
RPAP3Q9H6T3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.77■■□□□ 1.4
RPAP3Q9H6T3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RPAP3Q9H6T3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.77■■□□□ 1.4
RPAP3Q9H6T3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
RPAP3Q9H6T3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
RPAP3Q9H6T3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
RPAP3Q9H6T3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RPAP3Q9H6T3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RPAP3Q9H6T3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RPAP3Q9H6T3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RPAP3Q9H6T3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RPAP3Q9H6T3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RPAP3Q9H6T3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
RPAP3Q9H6T3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.76■■□□□ 1.39
RPAP3Q9H6T3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.76■■□□□ 1.39
RPAP3Q9H6T3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.76■■□□□ 1.39
RPAP3Q9H6T3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC23.76■■□□□ 1.39
RPAP3Q9H6T3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RPAP3Q9H6T3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RPAP3Q9H6T3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.76■■□□□ 1.39
RPAP3Q9H6T3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
RPAP3Q9H6T3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.75■■□□□ 1.39
RPAP3Q9H6T3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RPAP3Q9H6T3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RPAP3Q9H6T3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.75■■□□□ 1.39
RPAP3Q9H6T3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
RPAP3Q9H6T3 PGM5P4-201ENST00000421970 445 ntBASIC23.75■■□□□ 1.39
RPAP3Q9H6T3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RPAP3Q9H6T3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
RPAP3Q9H6T3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.75■■□□□ 1.39
RPAP3Q9H6T3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.74■■□□□ 1.39
RPAP3Q9H6T3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RPAP3Q9H6T3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
RPAP3Q9H6T3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RPAP3Q9H6T3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.74■■□□□ 1.39
RPAP3Q9H6T3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.74■■□□□ 1.39
RPAP3Q9H6T3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.74■■□□□ 1.39
RPAP3Q9H6T3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms