Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 MIR4767-201ENST00000582827 78 ntBASIC19.59■□□□□ 0.73
PIF1Q9H611 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PIF1Q9H611 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PIF1Q9H611 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PIF1Q9H611 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PIF1Q9H611 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.59■□□□□ 0.73
PIF1Q9H611 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.59■□□□□ 0.73
PIF1Q9H611 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PIF1Q9H611 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PIF1Q9H611 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PIF1Q9H611 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PIF1Q9H611 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PIF1Q9H611 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PIF1Q9H611 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.58■□□□□ 0.73
PIF1Q9H611 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PIF1Q9H611 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PIF1Q9H611 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
PIF1Q9H611 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PIF1Q9H611 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
PIF1Q9H611 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PIF1Q9H611 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.58■□□□□ 0.73
PIF1Q9H611 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PIF1Q9H611 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PIF1Q9H611 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PIF1Q9H611 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PIF1Q9H611 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
PIF1Q9H611 PBX2P1-201ENST00000493219 1291 ntBASIC19.58■□□□□ 0.72
PIF1Q9H611 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.58■□□□□ 0.72
PIF1Q9H611 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PIF1Q9H611 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PIF1Q9H611 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PIF1Q9H611 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.58■□□□□ 0.72
PIF1Q9H611 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
PIF1Q9H611 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PIF1Q9H611 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.57■□□□□ 0.72
PIF1Q9H611 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PIF1Q9H611 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PIF1Q9H611 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.57■□□□□ 0.72
PIF1Q9H611 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PIF1Q9H611 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.57■□□□□ 0.72
PIF1Q9H611 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PIF1Q9H611 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PIF1Q9H611 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PIF1Q9H611 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.57■□□□□ 0.72
PIF1Q9H611 BX842568.3-201ENST00000418104 571 ntBASIC19.57■□□□□ 0.72
PIF1Q9H611 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.57■□□□□ 0.72
PIF1Q9H611 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PIF1Q9H611 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.57■□□□□ 0.72
PIF1Q9H611 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.57■□□□□ 0.72
PIF1Q9H611 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PIF1Q9H611 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.57■□□□□ 0.72
PIF1Q9H611 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PIF1Q9H611 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PIF1Q9H611 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.57■□□□□ 0.72
PIF1Q9H611 AC055733.4-201ENST00000638462 1354 ntBASIC19.57■□□□□ 0.72
PIF1Q9H611 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.56■□□□□ 0.72
PIF1Q9H611 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.56■□□□□ 0.72
PIF1Q9H611 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PIF1Q9H611 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
PIF1Q9H611 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PIF1Q9H611 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PIF1Q9H611 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PIF1Q9H611 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.56■□□□□ 0.72
PIF1Q9H611 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PIF1Q9H611 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PIF1Q9H611 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.56■□□□□ 0.72
PIF1Q9H611 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.56■□□□□ 0.72
PIF1Q9H611 AC009237.3-201ENST00000393279 1427 ntBASIC19.56■□□□□ 0.72
PIF1Q9H611 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PIF1Q9H611 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PIF1Q9H611 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PIF1Q9H611 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.56■□□□□ 0.72
PIF1Q9H611 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PIF1Q9H611 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PIF1Q9H611 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PIF1Q9H611 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PIF1Q9H611 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.56■□□□□ 0.72
PIF1Q9H611 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PIF1Q9H611 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PIF1Q9H611 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PIF1Q9H611 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.55■□□□□ 0.72
PIF1Q9H611 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PIF1Q9H611 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.55■□□□□ 0.72
PIF1Q9H611 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PIF1Q9H611 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PIF1Q9H611 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PIF1Q9H611 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PIF1Q9H611 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.55■□□□□ 0.72
PIF1Q9H611 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.55■□□□□ 0.72
PIF1Q9H611 AC233992.3-201ENST00000607491 485 ntBASIC19.55■□□□□ 0.72
PIF1Q9H611 AL355001.2-201ENST00000620617 1191 ntBASIC19.55■□□□□ 0.72
PIF1Q9H611 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.55■□□□□ 0.72
PIF1Q9H611 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PIF1Q9H611 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PIF1Q9H611 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PIF1Q9H611 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PIF1Q9H611 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.55■□□□□ 0.72
PIF1Q9H611 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PIF1Q9H611 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.54■□□□□ 0.72
PIF1Q9H611 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms