Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.98■□□□□ 0.63
POLR2J3Q9H1A7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.98■□□□□ 0.63
POLR2J3Q9H1A7 PCDHAC2-203ENST00000615316 3011 ntBASIC18.98■□□□□ 0.63
POLR2J3Q9H1A7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.98■□□□□ 0.63
POLR2J3Q9H1A7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
POLR2J3Q9H1A7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
POLR2J3Q9H1A7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR2J3Q9H1A7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
POLR2J3Q9H1A7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR2J3Q9H1A7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
POLR2J3Q9H1A7 AC061975.6-201ENST00000579045 1553 ntBASIC18.98■□□□□ 0.63
POLR2J3Q9H1A7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.98■□□□□ 0.63
POLR2J3Q9H1A7 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR2J3Q9H1A7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
POLR2J3Q9H1A7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR2J3Q9H1A7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR2J3Q9H1A7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
POLR2J3Q9H1A7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR2J3Q9H1A7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR2J3Q9H1A7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.97■□□□□ 0.63
POLR2J3Q9H1A7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.97■□□□□ 0.63
POLR2J3Q9H1A7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR2J3Q9H1A7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR2J3Q9H1A7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.97■□□□□ 0.63
POLR2J3Q9H1A7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
POLR2J3Q9H1A7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
POLR2J3Q9H1A7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
POLR2J3Q9H1A7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR2J3Q9H1A7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
POLR2J3Q9H1A7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.97■□□□□ 0.63
POLR2J3Q9H1A7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR2J3Q9H1A7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR2J3Q9H1A7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
POLR2J3Q9H1A7 AC079140.4-201ENST00000507448 529 ntBASIC18.96■□□□□ 0.63
POLR2J3Q9H1A7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.96■□□□□ 0.63
POLR2J3Q9H1A7 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.96■□□□□ 0.63
POLR2J3Q9H1A7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
POLR2J3Q9H1A7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.96■□□□□ 0.63
POLR2J3Q9H1A7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.96■□□□□ 0.63
POLR2J3Q9H1A7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR2J3Q9H1A7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.96■□□□□ 0.63
POLR2J3Q9H1A7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.96■□□□□ 0.63
POLR2J3Q9H1A7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.96■□□□□ 0.63
POLR2J3Q9H1A7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR2J3Q9H1A7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
POLR2J3Q9H1A7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR2J3Q9H1A7 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 KRT16P2-201ENST00000414673 1423 ntBASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 AC138907.5-202ENST00000569484 235 ntBASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
POLR2J3Q9H1A7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2J3Q9H1A7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.94■□□□□ 0.62
POLR2J3Q9H1A7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
POLR2J3Q9H1A7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2J3Q9H1A7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2J3Q9H1A7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2J3Q9H1A7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2J3Q9H1A7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2J3Q9H1A7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.94■□□□□ 0.62
POLR2J3Q9H1A7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2J3Q9H1A7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
POLR2J3Q9H1A7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.94■□□□□ 0.62
POLR2J3Q9H1A7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
POLR2J3Q9H1A7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2J3Q9H1A7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
POLR2J3Q9H1A7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.94■□□□□ 0.62
POLR2J3Q9H1A7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
POLR2J3Q9H1A7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
POLR2J3Q9H1A7 AC027612.3-201ENST00000413684 1047 ntBASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms