Protein–RNA interactions for Protein: Q9H0Q0

FAM49A, Protein FAM49A, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49AQ9H0Q0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
FAM49AQ9H0Q0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.7■■□□□ 1.22
FAM49AQ9H0Q0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
FAM49AQ9H0Q0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
FAM49AQ9H0Q0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
FAM49AQ9H0Q0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
FAM49AQ9H0Q0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
FAM49AQ9H0Q0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
FAM49AQ9H0Q0 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
FAM49AQ9H0Q0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.69■■□□□ 1.22
FAM49AQ9H0Q0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
FAM49AQ9H0Q0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
FAM49AQ9H0Q0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FAM49AQ9H0Q0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FAM49AQ9H0Q0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FAM49AQ9H0Q0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
FAM49AQ9H0Q0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.69■■□□□ 1.22
FAM49AQ9H0Q0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
FAM49AQ9H0Q0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.69■■□□□ 1.22
FAM49AQ9H0Q0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FAM49AQ9H0Q0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
FAM49AQ9H0Q0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FAM49AQ9H0Q0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.68■■□□□ 1.22
FAM49AQ9H0Q0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.68■■□□□ 1.22
FAM49AQ9H0Q0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
FAM49AQ9H0Q0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
FAM49AQ9H0Q0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
FAM49AQ9H0Q0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
FAM49AQ9H0Q0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
FAM49AQ9H0Q0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
FAM49AQ9H0Q0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.68■■□□□ 1.22
FAM49AQ9H0Q0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC22.68■■□□□ 1.22
FAM49AQ9H0Q0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
FAM49AQ9H0Q0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
FAM49AQ9H0Q0 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
FAM49AQ9H0Q0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
FAM49AQ9H0Q0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
FAM49AQ9H0Q0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
FAM49AQ9H0Q0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
FAM49AQ9H0Q0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.67■■□□□ 1.22
FAM49AQ9H0Q0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
FAM49AQ9H0Q0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
FAM49AQ9H0Q0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC22.67■■□□□ 1.22
FAM49AQ9H0Q0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
FAM49AQ9H0Q0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.67■■□□□ 1.22
FAM49AQ9H0Q0 UNC93B4-201ENST00000505679 747 ntBASIC22.67■■□□□ 1.22
FAM49AQ9H0Q0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
FAM49AQ9H0Q0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.67■■□□□ 1.22
FAM49AQ9H0Q0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.67■■□□□ 1.22
FAM49AQ9H0Q0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.67■■□□□ 1.22
FAM49AQ9H0Q0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
FAM49AQ9H0Q0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
FAM49AQ9H0Q0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FAM49AQ9H0Q0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FAM49AQ9H0Q0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
FAM49AQ9H0Q0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FAM49AQ9H0Q0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.66■■□□□ 1.22
FAM49AQ9H0Q0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
FAM49AQ9H0Q0 AC133561.1-201ENST00000568600 2415 ntBASIC22.66■■□□□ 1.22
FAM49AQ9H0Q0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FAM49AQ9H0Q0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FAM49AQ9H0Q0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.66■■□□□ 1.22
FAM49AQ9H0Q0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
FAM49AQ9H0Q0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
FAM49AQ9H0Q0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.66■■□□□ 1.22
FAM49AQ9H0Q0 SOX15-203ENST00000570788 1093 ntBASIC22.66■■□□□ 1.22
FAM49AQ9H0Q0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.66■■□□□ 1.22
FAM49AQ9H0Q0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
FAM49AQ9H0Q0 AC087633.2-202ENST00000565166 1439 ntBASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 AL117328.2-201ENST00000624617 1940 ntBASIC22.65■■□□□ 1.22
FAM49AQ9H0Q0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
FAM49AQ9H0Q0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
FAM49AQ9H0Q0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC22.64■■□□□ 1.22
FAM49AQ9H0Q0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.64■■□□□ 1.22
FAM49AQ9H0Q0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.64■■□□□ 1.22
FAM49AQ9H0Q0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
FAM49AQ9H0Q0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
FAM49AQ9H0Q0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
FAM49AQ9H0Q0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC22.64■■□□□ 1.21
FAM49AQ9H0Q0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms