Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RNF38Q9H0F5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF38Q9H0F5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RNF38Q9H0F5 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC21.39■■□□□ 1.01
RNF38Q9H0F5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
RNF38Q9H0F5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.39■■□□□ 1.01
RNF38Q9H0F5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF38Q9H0F5 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF38Q9H0F5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF38Q9H0F5 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RNF38Q9H0F5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
RNF38Q9H0F5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF38Q9H0F5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF38Q9H0F5 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.38■■□□□ 1.01
RNF38Q9H0F5 UNC93B5-201ENST00000530315 699 ntBASIC21.38■■□□□ 1.01
RNF38Q9H0F5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF38Q9H0F5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.38■■□□□ 1.01
RNF38Q9H0F5 AC008687.6-201ENST00000596318 630 ntBASIC21.38■■□□□ 1.01
RNF38Q9H0F5 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF38Q9H0F5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RNF38Q9H0F5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RNF38Q9H0F5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF38Q9H0F5 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.37■■□□□ 1.01
RNF38Q9H0F5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
RNF38Q9H0F5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF38Q9H0F5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF38Q9H0F5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF38Q9H0F5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF38Q9H0F5 KRT18P29-201ENST00000397031 1267 ntBASIC21.36■■□□□ 1.01
RNF38Q9H0F5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RNF38Q9H0F5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF38Q9H0F5 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
RNF38Q9H0F5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.36■■□□□ 1.01
RNF38Q9H0F5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.36■■□□□ 1.01
RNF38Q9H0F5 AC105020.6-201ENST00000621523 1217 ntBASIC21.36■■□□□ 1.01
RNF38Q9H0F5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RNF38Q9H0F5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF38Q9H0F5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF38Q9H0F5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF38Q9H0F5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF38Q9H0F5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 PRORSD1P-201ENST00000295112 541 ntBASIC21.35■■□□□ 1.01
RNF38Q9H0F5 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF38Q9H0F5 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF38Q9H0F5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF38Q9H0F5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF38Q9H0F5 AL024507.2-201ENST00000606070 2574 ntBASIC21.34■■□□□ 1.01
RNF38Q9H0F5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF38Q9H0F5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.34■■□□□ 1.01
RNF38Q9H0F5 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.34■■□□□ 1.01
RNF38Q9H0F5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RNF38Q9H0F5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.34■■□□□ 1.01
RNF38Q9H0F5 HLA-B-256ENST00000639848 1089 ntBASIC21.34■■□□□ 1.01
RNF38Q9H0F5 AC066615.1-201ENST00000640911 628 ntBASIC21.34■■□□□ 1.01
RNF38Q9H0F5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RNF38Q9H0F5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms