Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.63■□□□□ 0.25
NKX6-2Q9C056 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 AC020763.4-201ENST00000623414 4170 ntBASIC16.62■□□□□ 0.25
NKX6-2Q9C056 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NKX6-2Q9C056 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.61■□□□□ 0.25
NKX6-2Q9C056 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
NKX6-2Q9C056 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-2Q9C056 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-2Q9C056 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NKX6-2Q9C056 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-2Q9C056 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.61■□□□□ 0.25
NKX6-2Q9C056 AC020907.5-201ENST00000624372 1936 ntBASIC16.61■□□□□ 0.25
NKX6-2Q9C056 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-2Q9C056 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-2Q9C056 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.61■□□□□ 0.25
NKX6-2Q9C056 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.61■□□□□ 0.25
NKX6-2Q9C056 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-2Q9C056 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-2Q9C056 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-2Q9C056 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-2Q9C056 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
NKX6-2Q9C056 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NKX6-2Q9C056 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 AC129492.7-201ENST00000622992 756 ntBASIC16.6■□□□□ 0.25
NKX6-2Q9C056 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NKX6-2Q9C056 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC16.59■□□□□ 0.25
NKX6-2Q9C056 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms