Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 AC004870.1-201ENST00000315132 882 ntBASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 EGLN1P1-201ENST00000531623 762 ntBASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.19■□□□□ 0.98
COL25A1Q9BXS0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.18■□□□□ 0.98
COL25A1Q9BXS0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
COL25A1Q9BXS0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL25A1Q9BXS0 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL25A1Q9BXS0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL25A1Q9BXS0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.18■□□□□ 0.98
COL25A1Q9BXS0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.18■□□□□ 0.98
COL25A1Q9BXS0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.18■□□□□ 0.98
COL25A1Q9BXS0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.18■□□□□ 0.98
COL25A1Q9BXS0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL25A1Q9BXS0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL25A1Q9BXS0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL25A1Q9BXS0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
COL25A1Q9BXS0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
COL25A1Q9BXS0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
COL25A1Q9BXS0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
COL25A1Q9BXS0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL25A1Q9BXS0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.17■□□□□ 0.98
COL25A1Q9BXS0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.17■□□□□ 0.98
COL25A1Q9BXS0 AC092183.1-201ENST00000469884 875 ntBASIC21.17■□□□□ 0.98
COL25A1Q9BXS0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.17■□□□□ 0.98
COL25A1Q9BXS0 YBX1P2-201ENST00000489612 999 ntBASIC21.17■□□□□ 0.98
COL25A1Q9BXS0 AP002982.1-201ENST00000492365 877 ntBASIC21.17■□□□□ 0.98
COL25A1Q9BXS0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
COL25A1Q9BXS0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.17■□□□□ 0.98
COL25A1Q9BXS0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
COL25A1Q9BXS0 AC005332.1-201ENST00000577698 1310 ntBASIC21.17■□□□□ 0.98
COL25A1Q9BXS0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL25A1Q9BXS0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL25A1Q9BXS0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL25A1Q9BXS0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL25A1Q9BXS0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL25A1Q9BXS0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.16■□□□□ 0.98
COL25A1Q9BXS0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.16■□□□□ 0.98
COL25A1Q9BXS0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL25A1Q9BXS0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.16■□□□□ 0.98
COL25A1Q9BXS0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.16■□□□□ 0.98
COL25A1Q9BXS0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.16■□□□□ 0.98
COL25A1Q9BXS0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 AC022898.2-201ENST00000616822 1312 ntBASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 TSPY14P-201ENST00000303979 915 ntBASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 SLC25A1P4-201ENST00000567977 778 ntBASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 AC004264.1-201ENST00000608354 794 ntBASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
COL25A1Q9BXS0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.14■□□□□ 0.98
COL25A1Q9BXS0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.14■□□□□ 0.98
COL25A1Q9BXS0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL25A1Q9BXS0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL25A1Q9BXS0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.14■□□□□ 0.97
COL25A1Q9BXS0 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.14■□□□□ 0.97
COL25A1Q9BXS0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC21.14■□□□□ 0.97
COL25A1Q9BXS0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.14■□□□□ 0.97
COL25A1Q9BXS0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms