Protein–RNA interactions for Protein: Q9BX26

SYCP2, Synaptonemal complex protein 2, humanhuman

Predictions only

Length 1,530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP2Q9BX26 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC31.17■■■□□ 2.58
SYCP2Q9BX26 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC31.17■■■□□ 2.58
SYCP2Q9BX26 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
SYCP2Q9BX26 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SYCP2Q9BX26 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC31.16■■■□□ 2.58
SYCP2Q9BX26 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
SYCP2Q9BX26 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC31.16■■■□□ 2.58
SYCP2Q9BX26 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
SYCP2Q9BX26 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC31.16■■■□□ 2.58
SYCP2Q9BX26 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
SYCP2Q9BX26 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
SYCP2Q9BX26 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
SYCP2Q9BX26 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
SYCP2Q9BX26 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC31.15■■■□□ 2.58
SYCP2Q9BX26 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SYCP2Q9BX26 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC31.15■■■□□ 2.58
SYCP2Q9BX26 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC31.15■■■□□ 2.58
SYCP2Q9BX26 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
SYCP2Q9BX26 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
SYCP2Q9BX26 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC31.15■■■□□ 2.58
SYCP2Q9BX26 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC31.15■■■□□ 2.58
SYCP2Q9BX26 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
SYCP2Q9BX26 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC31.14■■■□□ 2.58
SYCP2Q9BX26 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SYCP2Q9BX26 TSPY15P-201ENST00000457163 923 ntBASIC31.14■■■□□ 2.58
SYCP2Q9BX26 ABHD17AP6-201ENST00000458502 1044 ntBASIC31.14■■■□□ 2.58
SYCP2Q9BX26 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC31.14■■■□□ 2.58
SYCP2Q9BX26 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SYCP2Q9BX26 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC31.14■■■□□ 2.58
SYCP2Q9BX26 MAX-217ENST00000557277 728 ntTSL 3 BASIC31.14■■■□□ 2.58
SYCP2Q9BX26 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC31.14■■■□□ 2.58
SYCP2Q9BX26 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SYCP2Q9BX26 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
SYCP2Q9BX26 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC31.14■■■□□ 2.58
SYCP2Q9BX26 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SYCP2Q9BX26 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SYCP2Q9BX26 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC31.14■■■□□ 2.57
SYCP2Q9BX26 AC087499.1-201ENST00000418141 1075 ntBASIC31.14■■■□□ 2.57
SYCP2Q9BX26 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC31.14■■■□□ 2.57
SYCP2Q9BX26 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC31.14■■■□□ 2.57
SYCP2Q9BX26 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC31.13■■■□□ 2.57
SYCP2Q9BX26 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SYCP2Q9BX26 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SYCP2Q9BX26 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SYCP2Q9BX26 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
SYCP2Q9BX26 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SYCP2Q9BX26 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
SYCP2Q9BX26 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC31.13■■■□□ 2.57
SYCP2Q9BX26 THEM4-205ENST00000489410 643 ntTSL 2 BASIC31.13■■■□□ 2.57
SYCP2Q9BX26 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SYCP2Q9BX26 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
SYCP2Q9BX26 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC31.13■■■□□ 2.57
SYCP2Q9BX26 C9orf163-202ENST00000624034 2573 ntBASIC31.13■■■□□ 2.57
SYCP2Q9BX26 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
SYCP2Q9BX26 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
SYCP2Q9BX26 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
SYCP2Q9BX26 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
SYCP2Q9BX26 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SYCP2Q9BX26 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SYCP2Q9BX26 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SYCP2Q9BX26 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC31.12■■■□□ 2.57
SYCP2Q9BX26 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC31.12■■■□□ 2.57
SYCP2Q9BX26 REXO1L12P-201ENST00000622156 912 ntBASIC31.12■■■□□ 2.57
SYCP2Q9BX26 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SYCP2Q9BX26 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SYCP2Q9BX26 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SYCP2Q9BX26 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SYCP2Q9BX26 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SYCP2Q9BX26 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC31.11■■■□□ 2.57
SYCP2Q9BX26 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
SYCP2Q9BX26 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC31.11■■■□□ 2.57
SYCP2Q9BX26 RER1-204ENST00000378518 522 ntTSL 3 BASIC31.11■■■□□ 2.57
SYCP2Q9BX26 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC31.11■■■□□ 2.57
SYCP2Q9BX26 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC31.11■■■□□ 2.57
SYCP2Q9BX26 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC31.11■■■□□ 2.57
SYCP2Q9BX26 MIR4785-201ENST00000585005 73 ntBASIC31.11■■■□□ 2.57
SYCP2Q9BX26 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC31.11■■■□□ 2.57
SYCP2Q9BX26 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
SYCP2Q9BX26 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC31.11■■■□□ 2.57
SYCP2Q9BX26 AC120498.8-201ENST00000614275 531 ntBASIC31.11■■■□□ 2.57
SYCP2Q9BX26 SNX21-213ENST00000614929 587 ntTSL 5 BASIC31.11■■■□□ 2.57
SYCP2Q9BX26 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC31.11■■■□□ 2.57
SYCP2Q9BX26 AC006557.6-201ENST00000623071 864 ntBASIC31.11■■■□□ 2.57
SYCP2Q9BX26 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SYCP2Q9BX26 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SYCP2Q9BX26 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC31.11■■■□□ 2.57
SYCP2Q9BX26 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC31.11■■■□□ 2.57
SYCP2Q9BX26 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SYCP2Q9BX26 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
SYCP2Q9BX26 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
SYCP2Q9BX26 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC31.1■■■□□ 2.57
SYCP2Q9BX26 KRT18P21-201ENST00000515767 1272 ntBASIC31.1■■■□□ 2.57
SYCP2Q9BX26 PENK-204ENST00000518770 863 ntTSL 2 BASIC31.1■■■□□ 2.57
SYCP2Q9BX26 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC31.1■■■□□ 2.57
SYCP2Q9BX26 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
SYCP2Q9BX26 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SYCP2Q9BX26 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
SYCP2Q9BX26 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SYCP2Q9BX26 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SYCP2Q9BX26 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC31.1■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms