Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.81■□□□□ 0.92
LRFN3Q9BTN0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRFN3Q9BTN0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.81■□□□□ 0.92
LRFN3Q9BTN0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRFN3Q9BTN0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRFN3Q9BTN0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRFN3Q9BTN0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRFN3Q9BTN0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.8■□□□□ 0.92
LRFN3Q9BTN0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.8■□□□□ 0.92
LRFN3Q9BTN0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.8■□□□□ 0.92
LRFN3Q9BTN0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LRFN3Q9BTN0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.8■□□□□ 0.92
LRFN3Q9BTN0 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRFN3Q9BTN0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRFN3Q9BTN0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRFN3Q9BTN0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRFN3Q9BTN0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRFN3Q9BTN0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRFN3Q9BTN0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRFN3Q9BTN0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRFN3Q9BTN0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRFN3Q9BTN0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
LRFN3Q9BTN0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRFN3Q9BTN0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRFN3Q9BTN0 AC091390.4-202ENST00000476426 537 ntBASIC20.79■□□□□ 0.92
LRFN3Q9BTN0 AC116562.2-201ENST00000507042 360 ntBASIC20.79■□□□□ 0.92
LRFN3Q9BTN0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.79■□□□□ 0.92
LRFN3Q9BTN0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRFN3Q9BTN0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.79■□□□□ 0.92
LRFN3Q9BTN0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.79■□□□□ 0.92
LRFN3Q9BTN0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LRFN3Q9BTN0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LRFN3Q9BTN0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRFN3Q9BTN0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRFN3Q9BTN0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
LRFN3Q9BTN0 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRFN3Q9BTN0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRFN3Q9BTN0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRFN3Q9BTN0 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRFN3Q9BTN0 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRFN3Q9BTN0 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.78■□□□□ 0.92
LRFN3Q9BTN0 AL390719.1-204ENST00000412397 1219 ntBASIC20.78■□□□□ 0.92
LRFN3Q9BTN0 AC117947.1-201ENST00000427448 529 ntBASIC20.78■□□□□ 0.92
LRFN3Q9BTN0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.78■□□□□ 0.92
LRFN3Q9BTN0 AC128688.1-201ENST00000487626 519 ntBASIC20.78■□□□□ 0.92
LRFN3Q9BTN0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRFN3Q9BTN0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.78■□□□□ 0.92
LRFN3Q9BTN0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.78■□□□□ 0.92
LRFN3Q9BTN0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.78■□□□□ 0.92
LRFN3Q9BTN0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
LRFN3Q9BTN0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRFN3Q9BTN0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.77■□□□□ 0.92
LRFN3Q9BTN0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRFN3Q9BTN0 IER3-202ENST00000376377 1350 ntBASIC20.77■□□□□ 0.92
LRFN3Q9BTN0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.77■□□□□ 0.92
LRFN3Q9BTN0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.77■□□□□ 0.92
LRFN3Q9BTN0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRFN3Q9BTN0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.77■□□□□ 0.92
LRFN3Q9BTN0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRFN3Q9BTN0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
LRFN3Q9BTN0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.77■□□□□ 0.92
LRFN3Q9BTN0 FDX1P1-201ENST00000449115 551 ntBASIC20.77■□□□□ 0.92
LRFN3Q9BTN0 ECEL1P2-202ENST00000465689 757 ntBASIC20.77■□□□□ 0.92
LRFN3Q9BTN0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.77■□□□□ 0.92
LRFN3Q9BTN0 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRFN3Q9BTN0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRFN3Q9BTN0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRFN3Q9BTN0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRFN3Q9BTN0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRFN3Q9BTN0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LRFN3Q9BTN0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 AC007322.3-201ENST00000426526 701 ntBASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 FAM86EP-206ENST00000510506 987 ntBASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRFN3Q9BTN0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRFN3Q9BTN0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.75■□□□□ 0.91
LRFN3Q9BTN0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRFN3Q9BTN0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRFN3Q9BTN0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.75■□□□□ 0.91
LRFN3Q9BTN0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.75■□□□□ 0.91
LRFN3Q9BTN0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.75■□□□□ 0.91
LRFN3Q9BTN0 AP002982.1-201ENST00000492365 877 ntBASIC20.75■□□□□ 0.91
LRFN3Q9BTN0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms