Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NPAS1Q99742 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPAS1Q99742 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NPAS1Q99742 AC007322.4-201ENST00000509611 723 ntBASIC18.73■□□□□ 0.59
NPAS1Q99742 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.73■□□□□ 0.59
NPAS1Q99742 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
NPAS1Q99742 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPAS1Q99742 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.73■□□□□ 0.59
NPAS1Q99742 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPAS1Q99742 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NPAS1Q99742 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPAS1Q99742 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NPAS1Q99742 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPAS1Q99742 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.72■□□□□ 0.59
NPAS1Q99742 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NPAS1Q99742 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPAS1Q99742 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPAS1Q99742 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.72■□□□□ 0.59
NPAS1Q99742 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPAS1Q99742 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPAS1Q99742 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPAS1Q99742 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NPAS1Q99742 MIR663A-201ENST00000385250 93 ntBASIC18.72■□□□□ 0.59
NPAS1Q99742 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NPAS1Q99742 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NPAS1Q99742 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.72■□□□□ 0.59
NPAS1Q99742 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.72■□□□□ 0.59
NPAS1Q99742 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.72■□□□□ 0.59
NPAS1Q99742 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NPAS1Q99742 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
NPAS1Q99742 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NPAS1Q99742 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.71■□□□□ 0.59
NPAS1Q99742 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS1Q99742 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS1Q99742 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS1Q99742 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS1Q99742 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS1Q99742 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS1Q99742 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS1Q99742 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS1Q99742 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NPAS1Q99742 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS1Q99742 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS1Q99742 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.71■□□□□ 0.59
NPAS1Q99742 CYP2T1P-201ENST00000432607 1285 ntBASIC18.71■□□□□ 0.59
NPAS1Q99742 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS1Q99742 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.71■□□□□ 0.59
NPAS1Q99742 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.71■□□□□ 0.59
NPAS1Q99742 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS1Q99742 AC005181.1-201ENST00000604782 1256 ntBASIC18.71■□□□□ 0.59
NPAS1Q99742 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.71■□□□□ 0.59
NPAS1Q99742 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.71■□□□□ 0.59
NPAS1Q99742 AC121338.2-201ENST00000622535 1744 ntBASIC18.71■□□□□ 0.59
NPAS1Q99742 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.71■□□□□ 0.59
NPAS1Q99742 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.71■□□□□ 0.59
NPAS1Q99742 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.71■□□□□ 0.59
NPAS1Q99742 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.7■□□□□ 0.58
NPAS1Q99742 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NPAS1Q99742 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.7■□□□□ 0.58
NPAS1Q99742 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.7■□□□□ 0.58
NPAS1Q99742 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS1Q99742 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS1Q99742 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS1Q99742 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.7■□□□□ 0.58
NPAS1Q99742 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS1Q99742 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS1Q99742 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS1Q99742 AL591742.1-201ENST00000604433 565 ntBASIC18.7■□□□□ 0.58
NPAS1Q99742 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NPAS1Q99742 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS1Q99742 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS1Q99742 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS1Q99742 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS1Q99742 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.7■□□□□ 0.58
NPAS1Q99742 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NPAS1Q99742 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
NPAS1Q99742 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS1Q99742 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.69■□□□□ 0.58
NPAS1Q99742 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS1Q99742 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
NPAS1Q99742 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS1Q99742 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS1Q99742 AC116050.2-201ENST00000612102 1779 ntBASIC18.69■□□□□ 0.58
NPAS1Q99742 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS1Q99742 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.69■□□□□ 0.58
NPAS1Q99742 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.69■□□□□ 0.58
NPAS1Q99742 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS1Q99742 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS1Q99742 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.69■□□□□ 0.58
NPAS1Q99742 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.69■□□□□ 0.58
NPAS1Q99742 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS1Q99742 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPAS1Q99742 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
NPAS1Q99742 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS1Q99742 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS1Q99742 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS1Q99742 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS1Q99742 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPAS1Q99742 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.68■□□□□ 0.58
NPAS1Q99742 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms