Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SRD5A1P1-201ENST00000442297 786 ntBASIC16.64■□□□□ 0.25
RAB40CQ96S21 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB40CQ96S21 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB40CQ96S21 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB40CQ96S21 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC16.64■□□□□ 0.25
RAB40CQ96S21 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB40CQ96S21 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB40CQ96S21 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40CQ96S21 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RAB40CQ96S21 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.64■□□□□ 0.25
RAB40CQ96S21 AC011484.1-201ENST00000377652 1995 ntBASIC16.64■□□□□ 0.25
RAB40CQ96S21 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.64■□□□□ 0.25
RAB40CQ96S21 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40CQ96S21 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40CQ96S21 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40CQ96S21 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB40CQ96S21 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40CQ96S21 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40CQ96S21 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RAB40CQ96S21 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40CQ96S21 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.63■□□□□ 0.25
RAB40CQ96S21 AL138724.1-201ENST00000606771 1088 ntBASIC16.63■□□□□ 0.25
RAB40CQ96S21 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RAB40CQ96S21 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RAB40CQ96S21 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40CQ96S21 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40CQ96S21 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40CQ96S21 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RAB40CQ96S21 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40CQ96S21 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RAB40CQ96S21 AC087289.5-201ENST00000586076 3175 ntBASIC16.63■□□□□ 0.25
RAB40CQ96S21 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40CQ96S21 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RAB40CQ96S21 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RAB40CQ96S21 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40CQ96S21 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40CQ96S21 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40CQ96S21 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40CQ96S21 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB40CQ96S21 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RAB40CQ96S21 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB40CQ96S21 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40CQ96S21 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB40CQ96S21 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RAB40CQ96S21 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40CQ96S21 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40CQ96S21 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.62■□□□□ 0.25
RAB40CQ96S21 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB40CQ96S21 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40CQ96S21 AC018445.3-201ENST00000624177 1945 ntBASIC16.62■□□□□ 0.25
RAB40CQ96S21 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40CQ96S21 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB40CQ96S21 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40CQ96S21 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40CQ96S21 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40CQ96S21 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40CQ96S21 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB40CQ96S21 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40CQ96S21 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40CQ96S21 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
RAB40CQ96S21 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40CQ96S21 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40CQ96S21 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40CQ96S21 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40CQ96S21 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB40CQ96S21 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40CQ96S21 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB40CQ96S21 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.61■□□□□ 0.25
RAB40CQ96S21 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40CQ96S21 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40CQ96S21 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RAB40CQ96S21 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RAB40CQ96S21 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40CQ96S21 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40CQ96S21 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40CQ96S21 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB40CQ96S21 TCF3P1-201ENST00000423021 1937 ntBASIC16.6■□□□□ 0.25
RAB40CQ96S21 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40CQ96S21 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40CQ96S21 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40CQ96S21 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40CQ96S21 AC092720.2-201ENST00000602388 1665 ntBASIC16.6■□□□□ 0.25
RAB40CQ96S21 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40CQ96S21 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40CQ96S21 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40CQ96S21 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RAB40CQ96S21 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB40CQ96S21 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
RAB40CQ96S21 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB40CQ96S21 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40CQ96S21 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
RAB40CQ96S21 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB40CQ96S21 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40CQ96S21 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RAB40CQ96S21 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.6■□□□□ 0.25
RAB40CQ96S21 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RAB40CQ96S21 BX005040.4-201ENST00000637145 1518 ntBASIC16.6■□□□□ 0.25
RAB40CQ96S21 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RAB40CQ96S21 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB40CQ96S21 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms