Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.13■□□□□ 0.33
GAFA1Q96PS6 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAFA1Q96PS6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GAFA1Q96PS6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GAFA1Q96PS6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.13■□□□□ 0.33
GAFA1Q96PS6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 AC027702.1-201ENST00000563810 1770 ntBASIC17.12■□□□□ 0.33
GAFA1Q96PS6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 AC008694.1-202ENST00000636953 945 ntBASIC17.12■□□□□ 0.33
GAFA1Q96PS6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.12■□□□□ 0.33
GAFA1Q96PS6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAFA1Q96PS6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GAFA1Q96PS6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
GAFA1Q96PS6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAFA1Q96PS6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAFA1Q96PS6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAFA1Q96PS6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.11■□□□□ 0.33
GAFA1Q96PS6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GAFA1Q96PS6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAFA1Q96PS6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.11■□□□□ 0.33
GAFA1Q96PS6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.11■□□□□ 0.33
GAFA1Q96PS6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.11■□□□□ 0.33
GAFA1Q96PS6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAFA1Q96PS6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAFA1Q96PS6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAFA1Q96PS6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GAFA1Q96PS6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.11■□□□□ 0.33
GAFA1Q96PS6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.11■□□□□ 0.33
GAFA1Q96PS6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 AC006970.2-201ENST00000450065 779 ntBASIC17.1■□□□□ 0.33
GAFA1Q96PS6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 OR10C1-204ENST00000622521 1039 ntBASIC17.1■□□□□ 0.33
GAFA1Q96PS6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAFA1Q96PS6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAFA1Q96PS6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAFA1Q96PS6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAFA1Q96PS6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAFA1Q96PS6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.09■□□□□ 0.33
GAFA1Q96PS6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.09■□□□□ 0.33
GAFA1Q96PS6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.09■□□□□ 0.33
GAFA1Q96PS6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAFA1Q96PS6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.09■□□□□ 0.33
GAFA1Q96PS6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GAFA1Q96PS6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.09■□□□□ 0.33
GAFA1Q96PS6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAFA1Q96PS6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.09■□□□□ 0.33
GAFA1Q96PS6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAFA1Q96PS6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAFA1Q96PS6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GAFA1Q96PS6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GAFA1Q96PS6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAFA1Q96PS6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms