Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 AP000525.1-201ENST00000608286 694 ntBASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 AC243732.1-201ENST00000612648 864 ntBASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 AC023511.2-201ENST00000618803 211 ntBASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 AC079598.2-202ENST00000546624 1451 ntBASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNTNAP3BQ96NU0 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 NAPSB-206ENST00000562112 1266 ntBASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 AC100791.3-201ENST00000617619 330 ntBASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.7■□□□□ 0.74
CNTNAP3BQ96NU0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP3BQ96NU0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP3BQ96NU0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP3BQ96NU0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP3BQ96NU0 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP3BQ96NU0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.69■□□□□ 0.74
CNTNAP3BQ96NU0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.69■□□□□ 0.74
CNTNAP3BQ96NU0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.69■□□□□ 0.74
CNTNAP3BQ96NU0 AP000347.1-202ENST00000435868 847 ntBASIC19.69■□□□□ 0.74
CNTNAP3BQ96NU0 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.69■□□□□ 0.74
CNTNAP3BQ96NU0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP3BQ96NU0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CNTNAP3BQ96NU0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP3BQ96NU0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP3BQ96NU0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.69■□□□□ 0.74
CNTNAP3BQ96NU0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP3BQ96NU0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.69■□□□□ 0.74
CNTNAP3BQ96NU0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CNTNAP3BQ96NU0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP3BQ96NU0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNTNAP3BQ96NU0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
CNTNAP3BQ96NU0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTNAP3BQ96NU0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.68■□□□□ 0.74
CNTNAP3BQ96NU0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.68■□□□□ 0.74
CNTNAP3BQ96NU0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.68■□□□□ 0.74
CNTNAP3BQ96NU0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.68■□□□□ 0.74
CNTNAP3BQ96NU0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.68■□□□□ 0.74
CNTNAP3BQ96NU0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTNAP3BQ96NU0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CNTNAP3BQ96NU0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.68■□□□□ 0.74
CNTNAP3BQ96NU0 AL691432.3-201ENST00000621860 400 ntBASIC19.68■□□□□ 0.74
CNTNAP3BQ96NU0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.68■□□□□ 0.74
CNTNAP3BQ96NU0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNTNAP3BQ96NU0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTNAP3BQ96NU0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.68■□□□□ 0.74
CNTNAP3BQ96NU0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CNTNAP3BQ96NU0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTNAP3BQ96NU0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CNTNAP3BQ96NU0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTNAP3BQ96NU0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CNTNAP3BQ96NU0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNTNAP3BQ96NU0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNTNAP3BQ96NU0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNTNAP3BQ96NU0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNTNAP3BQ96NU0 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNTNAP3BQ96NU0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CNTNAP3BQ96NU0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CNTNAP3BQ96NU0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.67■□□□□ 0.74
CNTNAP3BQ96NU0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.67■□□□□ 0.74
CNTNAP3BQ96NU0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CNTNAP3BQ96NU0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CNTNAP3BQ96NU0 CYP2D8P-201ENST00000433633 1490 ntBASIC19.67■□□□□ 0.74
CNTNAP3BQ96NU0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 AP004607.7-201ENST00000527152 1677 ntBASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 UNC93B2-201ENST00000285383 730 ntBASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.66■□□□□ 0.74
CNTNAP3BQ96NU0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms