Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TMEM54Q969K7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.15■□□□□ 0.5
TMEM54Q969K7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM54Q969K7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
TMEM54Q969K7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TMEM54Q969K7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TMEM54Q969K7 AC068338.2-201ENST00000563278 1430 ntBASIC18.15■□□□□ 0.5
TMEM54Q969K7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
TMEM54Q969K7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TMEM54Q969K7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TMEM54Q969K7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM54Q969K7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM54Q969K7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM54Q969K7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM54Q969K7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.14■□□□□ 0.49
TMEM54Q969K7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM54Q969K7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM54Q969K7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM54Q969K7 AC016405.3-201ENST00000607710 860 ntBASIC18.14■□□□□ 0.49
TMEM54Q969K7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM54Q969K7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.14■□□□□ 0.49
TMEM54Q969K7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM54Q969K7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.14■□□□□ 0.49
TMEM54Q969K7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.14■□□□□ 0.49
TMEM54Q969K7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM54Q969K7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM54Q969K7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TMEM54Q969K7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TMEM54Q969K7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TMEM54Q969K7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM54Q969K7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM54Q969K7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
TMEM54Q969K7 FEM1AP1-201ENST00000431297 1995 ntBASIC18.13■□□□□ 0.49
TMEM54Q969K7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TMEM54Q969K7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM54Q969K7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM54Q969K7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
TMEM54Q969K7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM54Q969K7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM54Q969K7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM54Q969K7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM54Q969K7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM54Q969K7 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM54Q969K7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.13■□□□□ 0.49
TMEM54Q969K7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.13■□□□□ 0.49
TMEM54Q969K7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
TMEM54Q969K7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.13■□□□□ 0.49
TMEM54Q969K7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM54Q969K7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.13■□□□□ 0.49
TMEM54Q969K7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM54Q969K7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TMEM54Q969K7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
TMEM54Q969K7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM54Q969K7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TMEM54Q969K7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM54Q969K7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM54Q969K7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM54Q969K7 AC007322.1-201ENST00000426983 750 ntBASIC18.12■□□□□ 0.49
TMEM54Q969K7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.12■□□□□ 0.49
TMEM54Q969K7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM54Q969K7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM54Q969K7 AL137784.2-201ENST00000607332 1000 ntBASIC18.12■□□□□ 0.49
TMEM54Q969K7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM54Q969K7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM54Q969K7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM54Q969K7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM54Q969K7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM54Q969K7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM54Q969K7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.12■□□□□ 0.49
TMEM54Q969K7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.12■□□□□ 0.49
TMEM54Q969K7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM54Q969K7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
TMEM54Q969K7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM54Q969K7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.11■□□□□ 0.49
TMEM54Q969K7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM54Q969K7 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM54Q969K7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.11■□□□□ 0.49
TMEM54Q969K7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM54Q969K7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM54Q969K7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM54Q969K7 AC004911.1-201ENST00000416316 871 ntBASIC18.11■□□□□ 0.49
TMEM54Q969K7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.11■□□□□ 0.49
TMEM54Q969K7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.11■□□□□ 0.49
TMEM54Q969K7 AC080038.1-201ENST00000611274 1154 ntBASIC18.11■□□□□ 0.49
TMEM54Q969K7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TMEM54Q969K7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.11■□□□□ 0.49
TMEM54Q969K7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM54Q969K7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.11■□□□□ 0.49
TMEM54Q969K7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
TMEM54Q969K7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM54Q969K7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TMEM54Q969K7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.11■□□□□ 0.49
TMEM54Q969K7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM54Q969K7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM54Q969K7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.11■□□□□ 0.49
TMEM54Q969K7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM54Q969K7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.11■□□□□ 0.49
TMEM54Q969K7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
TMEM54Q969K7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM54Q969K7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms