Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 KRT18P21-201ENST00000515767 1272 ntBASIC19.59■□□□□ 0.73
TTC9Q92623 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.59■□□□□ 0.73
TTC9Q92623 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.59■□□□□ 0.73
TTC9Q92623 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TTC9Q92623 AL591742.1-201ENST00000604433 565 ntBASIC19.59■□□□□ 0.73
TTC9Q92623 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC9Q92623 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TTC9Q92623 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TTC9Q92623 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TTC9Q92623 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TTC9Q92623 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.58■□□□□ 0.73
TTC9Q92623 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
TTC9Q92623 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
TTC9Q92623 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TTC9Q92623 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TTC9Q92623 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TTC9Q92623 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TTC9Q92623 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TTC9Q92623 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TTC9Q92623 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.58■□□□□ 0.72
TTC9Q92623 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.58■□□□□ 0.72
TTC9Q92623 C1QBPP2-201ENST00000528754 825 ntBASIC19.58■□□□□ 0.72
TTC9Q92623 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.58■□□□□ 0.72
TTC9Q92623 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.58■□□□□ 0.72
TTC9Q92623 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TTC9Q92623 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TTC9Q92623 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TTC9Q92623 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.58■□□□□ 0.72
TTC9Q92623 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TTC9Q92623 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TTC9Q92623 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.58■□□□□ 0.72
TTC9Q92623 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.57■□□□□ 0.72
TTC9Q92623 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TTC9Q92623 FAM99A-202ENST00000538190 1989 ntBASIC19.57■□□□□ 0.72
TTC9Q92623 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC9Q92623 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.57■□□□□ 0.72
TTC9Q92623 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TTC9Q92623 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.57■□□□□ 0.72
TTC9Q92623 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC9Q92623 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TTC9Q92623 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC9Q92623 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TTC9Q92623 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.57■□□□□ 0.72
TTC9Q92623 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC9Q92623 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.57■□□□□ 0.72
TTC9Q92623 CYP2T3P-201ENST00000601990 817 ntBASIC19.57■□□□□ 0.72
TTC9Q92623 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC9Q92623 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.57■□□□□ 0.72
TTC9Q92623 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC9Q92623 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TTC9Q92623 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.57■□□□□ 0.72
TTC9Q92623 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TTC9Q92623 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TTC9Q92623 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TTC9Q92623 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TTC9Q92623 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TTC9Q92623 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TTC9Q92623 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TTC9Q92623 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.56■□□□□ 0.72
TTC9Q92623 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
TTC9Q92623 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.56■□□□□ 0.72
TTC9Q92623 AC120498.10-201ENST00000621827 505 ntBASIC19.56■□□□□ 0.72
TTC9Q92623 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
TTC9Q92623 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.56■□□□□ 0.72
TTC9Q92623 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
TTC9Q92623 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TTC9Q92623 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.56■□□□□ 0.72
TTC9Q92623 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TTC9Q92623 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
TTC9Q92623 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TTC9Q92623 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TTC9Q92623 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TTC9Q92623 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TTC9Q92623 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TTC9Q92623 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TTC9Q92623 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.55■□□□□ 0.72
TTC9Q92623 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TTC9Q92623 LSM12P1-201ENST00000411836 588 ntBASIC19.55■□□□□ 0.72
TTC9Q92623 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.55■□□□□ 0.72
TTC9Q92623 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.55■□□□□ 0.72
TTC9Q92623 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TTC9Q92623 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.55■□□□□ 0.72
TTC9Q92623 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.55■□□□□ 0.72
TTC9Q92623 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TTC9Q92623 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TTC9Q92623 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.55■□□□□ 0.72
TTC9Q92623 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.55■□□□□ 0.72
TTC9Q92623 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.55■□□□□ 0.72
TTC9Q92623 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TTC9Q92623 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TTC9Q92623 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TTC9Q92623 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TTC9Q92623 AC073130.3-201ENST00000624389 2278 ntBASIC19.54■□□□□ 0.72
TTC9Q92623 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TTC9Q92623 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
TTC9Q92623 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.54■□□□□ 0.72
TTC9Q92623 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TTC9Q92623 C11orf96-202ENST00000528572 1834 ntBASIC19.54■□□□□ 0.72
TTC9Q92623 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.54■□□□□ 0.72
TTC9Q92623 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms