Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TM9SF4Q92544 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TM9SF4Q92544 BX276092.2-201ENST00000417668 665 ntBASIC19.37■□□□□ 0.69
TM9SF4Q92544 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.37■□□□□ 0.69
TM9SF4Q92544 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.37■□□□□ 0.69
TM9SF4Q92544 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TM9SF4Q92544 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TM9SF4Q92544 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM9SF4Q92544 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
TM9SF4Q92544 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TM9SF4Q92544 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TM9SF4Q92544 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.36■□□□□ 0.69
TM9SF4Q92544 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TM9SF4Q92544 AC097658.1-201ENST00000475555 843 ntBASIC19.36■□□□□ 0.69
TM9SF4Q92544 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.36■□□□□ 0.69
TM9SF4Q92544 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.36■□□□□ 0.69
TM9SF4Q92544 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TM9SF4Q92544 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TM9SF4Q92544 ITM2C-210ENST00000620962 501 ntBASIC19.36■□□□□ 0.69
TM9SF4Q92544 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.36■□□□□ 0.69
TM9SF4Q92544 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM9SF4Q92544 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM9SF4Q92544 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM9SF4Q92544 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TM9SF4Q92544 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.35■□□□□ 0.69
TM9SF4Q92544 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF4Q92544 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF4Q92544 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF4Q92544 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF4Q92544 Z98882.1-201ENST00000622160 2253 ntBASIC19.35■□□□□ 0.69
TM9SF4Q92544 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF4Q92544 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TM9SF4Q92544 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF4Q92544 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF4Q92544 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF4Q92544 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF4Q92544 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF4Q92544 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF4Q92544 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF4Q92544 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.35■□□□□ 0.69
TM9SF4Q92544 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TM9SF4Q92544 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
TM9SF4Q92544 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.35■□□□□ 0.69
TM9SF4Q92544 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TM9SF4Q92544 AC093787.1-201ENST00000450396 207 ntBASIC19.35■□□□□ 0.69
TM9SF4Q92544 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.35■□□□□ 0.69
TM9SF4Q92544 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF4Q92544 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.35■□□□□ 0.69
TM9SF4Q92544 AC243732.1-201ENST00000612648 864 ntBASIC19.35■□□□□ 0.69
TM9SF4Q92544 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF4Q92544 AL157384.1-201ENST00000445995 2473 ntBASIC19.35■□□□□ 0.69
TM9SF4Q92544 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
TM9SF4Q92544 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.35■□□□□ 0.69
TM9SF4Q92544 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TM9SF4Q92544 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF4Q92544 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TM9SF4Q92544 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF4Q92544 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF4Q92544 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF4Q92544 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF4Q92544 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.34■□□□□ 0.69
TM9SF4Q92544 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.34■□□□□ 0.69
TM9SF4Q92544 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF4Q92544 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF4Q92544 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF4Q92544 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.34■□□□□ 0.69
TM9SF4Q92544 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
TM9SF4Q92544 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TM9SF4Q92544 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.34■□□□□ 0.69
TM9SF4Q92544 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF4Q92544 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
TM9SF4Q92544 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
TM9SF4Q92544 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF4Q92544 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TM9SF4Q92544 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF4Q92544 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TM9SF4Q92544 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF4Q92544 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF4Q92544 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF4Q92544 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF4Q92544 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TM9SF4Q92544 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.34■□□□□ 0.69
TM9SF4Q92544 RBM17P2-201ENST00000616397 1405 ntBASIC19.34■□□□□ 0.69
TM9SF4Q92544 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TM9SF4Q92544 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TM9SF4Q92544 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.33■□□□□ 0.69
TM9SF4Q92544 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TM9SF4Q92544 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TM9SF4Q92544 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.33■□□□□ 0.68
TM9SF4Q92544 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.33■□□□□ 0.68
TM9SF4Q92544 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.33■□□□□ 0.68
TM9SF4Q92544 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.33■□□□□ 0.68
TM9SF4Q92544 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.33■□□□□ 0.68
TM9SF4Q92544 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.33■□□□□ 0.68
TM9SF4Q92544 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
TM9SF4Q92544 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM9SF4Q92544 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM9SF4Q92544 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM9SF4Q92544 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM9SF4Q92544 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms