Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF2Q8TEC5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SH3RF2Q8TEC5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.38■■□□□ 1.01
SH3RF2Q8TEC5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.38■■□□□ 1.01
SH3RF2Q8TEC5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF2Q8TEC5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF2Q8TEC5 AC006058.3-201ENST00000606217 1069 ntBASIC21.38■■□□□ 1.01
SH3RF2Q8TEC5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF2Q8TEC5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SH3RF2Q8TEC5 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF2Q8TEC5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF2Q8TEC5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF2Q8TEC5 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.38■■□□□ 1.01
SH3RF2Q8TEC5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
SH3RF2Q8TEC5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF2Q8TEC5 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF2Q8TEC5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF2Q8TEC5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF2Q8TEC5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SH3RF2Q8TEC5 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
SH3RF2Q8TEC5 AL137060.1-201ENST00000618151 2648 ntBASIC21.37■■□□□ 1.01
SH3RF2Q8TEC5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF2Q8TEC5 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF2Q8TEC5 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.37■■□□□ 1.01
SH3RF2Q8TEC5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF2Q8TEC5 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF2Q8TEC5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.37■■□□□ 1.01
SH3RF2Q8TEC5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.37■■□□□ 1.01
SH3RF2Q8TEC5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF2Q8TEC5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF2Q8TEC5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF2Q8TEC5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF2Q8TEC5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.36■■□□□ 1.01
SH3RF2Q8TEC5 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SH3RF2Q8TEC5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF2Q8TEC5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF2Q8TEC5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.36■■□□□ 1.01
SH3RF2Q8TEC5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SH3RF2Q8TEC5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF2Q8TEC5 AC026366.1-201ENST00000488803 879 ntBASIC21.36■■□□□ 1.01
SH3RF2Q8TEC5 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.36■■□□□ 1.01
SH3RF2Q8TEC5 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF2Q8TEC5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.36■■□□□ 1.01
SH3RF2Q8TEC5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SH3RF2Q8TEC5 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.36■■□□□ 1.01
SH3RF2Q8TEC5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
SH3RF2Q8TEC5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF2Q8TEC5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
SH3RF2Q8TEC5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.36■■□□□ 1.01
SH3RF2Q8TEC5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF2Q8TEC5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SH3RF2Q8TEC5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 AP003097.1-201ENST00000530657 1135 ntBASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 AC060766.5-201ENST00000590539 871 ntBASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 HLA-B-256ENST00000639848 1089 ntBASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.35■■□□□ 1.01
SH3RF2Q8TEC5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH3RF2Q8TEC5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH3RF2Q8TEC5 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SH3RF2Q8TEC5 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.34■■□□□ 1.01
SH3RF2Q8TEC5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SH3RF2Q8TEC5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH3RF2Q8TEC5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SH3RF2Q8TEC5 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.34■■□□□ 1.01
SH3RF2Q8TEC5 AC128676.1-201ENST00000454392 318 ntBASIC21.34■■□□□ 1.01
SH3RF2Q8TEC5 AC098590.1-201ENST00000468126 897 ntBASIC21.34■■□□□ 1.01
SH3RF2Q8TEC5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SH3RF2Q8TEC5 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.34■■□□□ 1.01
SH3RF2Q8TEC5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.34■■□□□ 1.01
SH3RF2Q8TEC5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SH3RF2Q8TEC5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.34■■□□□ 1.01
SH3RF2Q8TEC5 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.34■■□□□ 1.01
SH3RF2Q8TEC5 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.34■■□□□ 1.01
SH3RF2Q8TEC5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.34■■□□□ 1.01
SH3RF2Q8TEC5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
SH3RF2Q8TEC5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.33■■□□□ 1.01
SH3RF2Q8TEC5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH3RF2Q8TEC5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH3RF2Q8TEC5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SH3RF2Q8TEC5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms