Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD5Q8TDI0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD5Q8TDI0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD5Q8TDI0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD5Q8TDI0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD5Q8TDI0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHD5Q8TDI0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CHD5Q8TDI0 AC069152.1-201ENST00000438030 544 ntBASIC20.92■□□□□ 0.94
CHD5Q8TDI0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.92■□□□□ 0.94
CHD5Q8TDI0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CHD5Q8TDI0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.91■□□□□ 0.94
CHD5Q8TDI0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CHD5Q8TDI0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.91■□□□□ 0.94
CHD5Q8TDI0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD5Q8TDI0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD5Q8TDI0 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CHD5Q8TDI0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD5Q8TDI0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD5Q8TDI0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHD5Q8TDI0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD5Q8TDI0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD5Q8TDI0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
CHD5Q8TDI0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHD5Q8TDI0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.9■□□□□ 0.94
CHD5Q8TDI0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHD5Q8TDI0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.9■□□□□ 0.94
CHD5Q8TDI0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.9■□□□□ 0.94
CHD5Q8TDI0 AC091874.3-201ENST00000512672 1195 ntBASIC20.9■□□□□ 0.94
CHD5Q8TDI0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CHD5Q8TDI0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CHD5Q8TDI0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.9■□□□□ 0.94
CHD5Q8TDI0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
CHD5Q8TDI0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHD5Q8TDI0 PGM5P4-201ENST00000421970 445 ntBASIC20.9■□□□□ 0.94
CHD5Q8TDI0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.9■□□□□ 0.94
CHD5Q8TDI0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CHD5Q8TDI0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.89■□□□□ 0.94
CHD5Q8TDI0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CHD5Q8TDI0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CHD5Q8TDI0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHD5Q8TDI0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.89■□□□□ 0.94
CHD5Q8TDI0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHD5Q8TDI0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.89■□□□□ 0.93
CHD5Q8TDI0 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.89■□□□□ 0.93
CHD5Q8TDI0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.89■□□□□ 0.93
CHD5Q8TDI0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.89■□□□□ 0.93
CHD5Q8TDI0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CHD5Q8TDI0 AC027702.1-201ENST00000563810 1770 ntBASIC20.89■□□□□ 0.93
CHD5Q8TDI0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.89■□□□□ 0.93
CHD5Q8TDI0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHD5Q8TDI0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.88■□□□□ 0.93
CHD5Q8TDI0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.88■□□□□ 0.93
CHD5Q8TDI0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD5Q8TDI0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD5Q8TDI0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD5Q8TDI0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD5Q8TDI0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CHD5Q8TDI0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD5Q8TDI0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHD5Q8TDI0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD5Q8TDI0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD5Q8TDI0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHD5Q8TDI0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.88■□□□□ 0.93
CHD5Q8TDI0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD5Q8TDI0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHD5Q8TDI0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHD5Q8TDI0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD5Q8TDI0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD5Q8TDI0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD5Q8TDI0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD5Q8TDI0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
CHD5Q8TDI0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD5Q8TDI0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHD5Q8TDI0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD5Q8TDI0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CHD5Q8TDI0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CHD5Q8TDI0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CHD5Q8TDI0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD5Q8TDI0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD5Q8TDI0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CHD5Q8TDI0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHD5Q8TDI0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHD5Q8TDI0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.86■□□□□ 0.93
CHD5Q8TDI0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD5Q8TDI0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.86■□□□□ 0.93
CHD5Q8TDI0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.86■□□□□ 0.93
CHD5Q8TDI0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD5Q8TDI0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD5Q8TDI0 AC092118.2-201ENST00000613495 667 ntBASIC20.86■□□□□ 0.93
CHD5Q8TDI0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD5Q8TDI0 KRT8P36-201ENST00000489121 1440 ntBASIC20.86■□□□□ 0.93
CHD5Q8TDI0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD5Q8TDI0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD5Q8TDI0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD5Q8TDI0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD5Q8TDI0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD5Q8TDI0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CHD5Q8TDI0 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.86■□□□□ 0.93
CHD5Q8TDI0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.86■□□□□ 0.93
CHD5Q8TDI0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms