Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.23■□□□□ 0.83
RDH11Q8TC12 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RDH11Q8TC12 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RDH11Q8TC12 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RDH11Q8TC12 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RDH11Q8TC12 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RDH11Q8TC12 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RDH11Q8TC12 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RDH11Q8TC12 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RDH11Q8TC12 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RDH11Q8TC12 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.22■□□□□ 0.83
RDH11Q8TC12 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RDH11Q8TC12 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
RDH11Q8TC12 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RDH11Q8TC12 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RDH11Q8TC12 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RDH11Q8TC12 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RDH11Q8TC12 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RDH11Q8TC12 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.22■□□□□ 0.83
RDH11Q8TC12 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.22■□□□□ 0.83
RDH11Q8TC12 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RDH11Q8TC12 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.22■□□□□ 0.83
RDH11Q8TC12 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RDH11Q8TC12 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RDH11Q8TC12 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.22■□□□□ 0.83
RDH11Q8TC12 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.22■□□□□ 0.83
RDH11Q8TC12 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.22■□□□□ 0.83
RDH11Q8TC12 AL354811.1-201ENST00000610286 706 ntBASIC20.22■□□□□ 0.83
RDH11Q8TC12 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RDH11Q8TC12 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.22■□□□□ 0.83
RDH11Q8TC12 AC019069.1-201ENST00000610008 1333 ntBASIC20.22■□□□□ 0.83
RDH11Q8TC12 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RDH11Q8TC12 AFG3L1P-217ENST00000557444 2447 ntBASIC20.22■□□□□ 0.83
RDH11Q8TC12 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
RDH11Q8TC12 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RDH11Q8TC12 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.21■□□□□ 0.83
RDH11Q8TC12 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RDH11Q8TC12 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RDH11Q8TC12 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RDH11Q8TC12 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RDH11Q8TC12 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RDH11Q8TC12 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RDH11Q8TC12 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RDH11Q8TC12 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RDH11Q8TC12 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.21■□□□□ 0.83
RDH11Q8TC12 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RDH11Q8TC12 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.21■□□□□ 0.83
RDH11Q8TC12 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
RDH11Q8TC12 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.21■□□□□ 0.83
RDH11Q8TC12 AC142381.2-201ENST00000566120 298 ntBASIC20.21■□□□□ 0.83
RDH11Q8TC12 RARRES2P11-201ENST00000635158 484 ntBASIC20.21■□□□□ 0.83
RDH11Q8TC12 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RDH11Q8TC12 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RDH11Q8TC12 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RDH11Q8TC12 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RDH11Q8TC12 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RDH11Q8TC12 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RDH11Q8TC12 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.2■□□□□ 0.82
RDH11Q8TC12 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.2■□□□□ 0.82
RDH11Q8TC12 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RDH11Q8TC12 KRT16P2-201ENST00000414673 1423 ntBASIC20.2■□□□□ 0.82
RDH11Q8TC12 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RDH11Q8TC12 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.2■□□□□ 0.82
RDH11Q8TC12 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.2■□□□□ 0.82
RDH11Q8TC12 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.2■□□□□ 0.82
RDH11Q8TC12 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.2■□□□□ 0.82
RDH11Q8TC12 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.2■□□□□ 0.82
RDH11Q8TC12 AC245052.3-201ENST00000450182 901 ntBASIC20.2■□□□□ 0.82
RDH11Q8TC12 AF213884.3-201ENST00000563833 479 ntBASIC20.2■□□□□ 0.82
RDH11Q8TC12 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.2■□□□□ 0.82
RDH11Q8TC12 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RDH11Q8TC12 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.2■□□□□ 0.82
RDH11Q8TC12 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RDH11Q8TC12 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.2■□□□□ 0.82
RDH11Q8TC12 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RDH11Q8TC12 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RDH11Q8TC12 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RDH11Q8TC12 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RDH11Q8TC12 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RDH11Q8TC12 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.19■□□□□ 0.82
RDH11Q8TC12 KRT87P-202ENST00000534226 1464 ntBASIC20.19■□□□□ 0.82
RDH11Q8TC12 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH11Q8TC12 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.19■□□□□ 0.82
RDH11Q8TC12 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.19■□□□□ 0.82
RDH11Q8TC12 AC007952.6-201ENST00000573168 2673 ntBASIC20.19■□□□□ 0.82
RDH11Q8TC12 AC003957.1-201ENST00000625108 2673 ntBASIC20.19■□□□□ 0.82
RDH11Q8TC12 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH11Q8TC12 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.19■□□□□ 0.82
RDH11Q8TC12 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH11Q8TC12 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RDH11Q8TC12 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RDH11Q8TC12 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RDH11Q8TC12 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.19■□□□□ 0.82
RDH11Q8TC12 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RDH11Q8TC12 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RDH11Q8TC12 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RDH11Q8TC12 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RDH11Q8TC12 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RDH11Q8TC12 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RDH11Q8TC12 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms