Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
CCDC148Q8NFR7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC148Q8NFR7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CCDC148Q8NFR7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.7■■□□□ 1.38
CCDC148Q8NFR7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC148Q8NFR7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC148Q8NFR7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 PLK5-205ENST00000642079 1969 ntBASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 AC069236.1-201ENST00000604339 616 ntBASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 AC016405.3-201ENST00000607710 860 ntBASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC148Q8NFR7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 MIR663A-201ENST00000385250 93 ntBASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 RARRES2P4-201ENST00000514074 484 ntBASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 AC008694.1-202ENST00000636953 945 ntBASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC148Q8NFR7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.67■■□□□ 1.38
CCDC148Q8NFR7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CCDC148Q8NFR7 AC006128.1-201ENST00000624704 1661 ntBASIC23.67■■□□□ 1.38
CCDC148Q8NFR7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC148Q8NFR7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CCDC148Q8NFR7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.67■■□□□ 1.38
CCDC148Q8NFR7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.67■■□□□ 1.38
CCDC148Q8NFR7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.67■■□□□ 1.38
CCDC148Q8NFR7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.67■■□□□ 1.38
CCDC148Q8NFR7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
CCDC148Q8NFR7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC148Q8NFR7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.66■■□□□ 1.38
CCDC148Q8NFR7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.66■■□□□ 1.38
CCDC148Q8NFR7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC148Q8NFR7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.66■■□□□ 1.38
CCDC148Q8NFR7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
CCDC148Q8NFR7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC148Q8NFR7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.66■■□□□ 1.38
CCDC148Q8NFR7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.66■■□□□ 1.38
CCDC148Q8NFR7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC148Q8NFR7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC23.66■■□□□ 1.38
CCDC148Q8NFR7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 CROCCP5-201ENST00000436658 830 ntBASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 OR10C1-204ENST00000622521 1039 ntBASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CCDC148Q8NFR7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC148Q8NFR7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
CCDC148Q8NFR7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
CCDC148Q8NFR7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.64■■□□□ 1.38
CCDC148Q8NFR7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CCDC148Q8NFR7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.64■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms