Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC25.46■■□□□ 1.67
RTL9Q8NET4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
RTL9Q8NET4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RTL9Q8NET4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC25.46■■□□□ 1.67
RTL9Q8NET4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC25.46■■□□□ 1.67
RTL9Q8NET4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
RTL9Q8NET4 AC244015.2-201ENST00000616358 1861 ntBASIC25.46■■□□□ 1.67
RTL9Q8NET4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
RTL9Q8NET4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
RTL9Q8NET4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC25.45■■□□□ 1.67
RTL9Q8NET4 PGM5P4-201ENST00000421970 445 ntBASIC25.45■■□□□ 1.67
RTL9Q8NET4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC25.45■■□□□ 1.67
RTL9Q8NET4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC25.45■■□□□ 1.67
RTL9Q8NET4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
RTL9Q8NET4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
RTL9Q8NET4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RTL9Q8NET4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RTL9Q8NET4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
RTL9Q8NET4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RTL9Q8NET4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RTL9Q8NET4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
RTL9Q8NET4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTL9Q8NET4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
RTL9Q8NET4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.44■■□□□ 1.66
RTL9Q8NET4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTL9Q8NET4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
RTL9Q8NET4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
RTL9Q8NET4 AC008550.1-201ENST00000511500 884 ntBASIC25.44■■□□□ 1.66
RTL9Q8NET4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC25.44■■□□□ 1.66
RTL9Q8NET4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC25.43■■□□□ 1.66
RTL9Q8NET4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RTL9Q8NET4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RTL9Q8NET4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
RTL9Q8NET4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.43■■□□□ 1.66
RTL9Q8NET4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC25.43■■□□□ 1.66
RTL9Q8NET4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RTL9Q8NET4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
RTL9Q8NET4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RTL9Q8NET4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC25.43■■□□□ 1.66
RTL9Q8NET4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC25.43■■□□□ 1.66
RTL9Q8NET4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RTL9Q8NET4 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RTL9Q8NET4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC25.43■■□□□ 1.66
RTL9Q8NET4 SOX15-203ENST00000570788 1093 ntBASIC25.43■■□□□ 1.66
RTL9Q8NET4 AL356652.1-201ENST00000615962 565 ntBASIC25.43■■□□□ 1.66
RTL9Q8NET4 AL359736.2-201ENST00000621992 437 ntBASIC25.43■■□□□ 1.66
RTL9Q8NET4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC25.43■■□□□ 1.66
RTL9Q8NET4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RTL9Q8NET4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTL9Q8NET4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RTL9Q8NET4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RTL9Q8NET4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC25.42■■□□□ 1.66
RTL9Q8NET4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
RTL9Q8NET4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC25.42■■□□□ 1.66
RTL9Q8NET4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC25.42■■□□□ 1.66
RTL9Q8NET4 OR2A1-AS1-207ENST00000486094 819 ntBASIC25.42■■□□□ 1.66
RTL9Q8NET4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTL9Q8NET4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC25.41■■□□□ 1.66
RTL9Q8NET4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTL9Q8NET4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTL9Q8NET4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTL9Q8NET4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
RTL9Q8NET4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTL9Q8NET4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC25.41■■□□□ 1.66
RTL9Q8NET4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTL9Q8NET4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTL9Q8NET4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTL9Q8NET4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTL9Q8NET4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC25.41■■□□□ 1.66
RTL9Q8NET4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC25.41■■□□□ 1.66
RTL9Q8NET4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC25.41■■□□□ 1.66
RTL9Q8NET4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTL9Q8NET4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
RTL9Q8NET4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
RTL9Q8NET4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC25.4■■□□□ 1.66
RTL9Q8NET4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC25.4■■□□□ 1.66
RTL9Q8NET4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RTL9Q8NET4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
RTL9Q8NET4 AL117328.2-201ENST00000624617 1940 ntBASIC25.4■■□□□ 1.66
RTL9Q8NET4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
RTL9Q8NET4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
RTL9Q8NET4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RTL9Q8NET4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC25.4■■□□□ 1.66
RTL9Q8NET4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RTL9Q8NET4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RTL9Q8NET4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RTL9Q8NET4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RTL9Q8NET4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.66
RTL9Q8NET4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
RTL9Q8NET4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC25.39■■□□□ 1.66
RTL9Q8NET4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RTL9Q8NET4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RTL9Q8NET4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RTL9Q8NET4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC25.39■■□□□ 1.65
RTL9Q8NET4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
RTL9Q8NET4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC25.39■■□□□ 1.65
RTL9Q8NET4 AC069544.1-201ENST00000609399 999 ntBASIC25.39■■□□□ 1.65
RTL9Q8NET4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RTL9Q8NET4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC25.39■■□□□ 1.65
RTL9Q8NET4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms