Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LINC00116Q8NCU8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
LINC00116Q8NCU8 PRKY-204ENST00000533551 1019 ntBASIC26.32■■□□□ 1.8
LINC00116Q8NCU8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC26.32■■□□□ 1.8
LINC00116Q8NCU8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC26.32■■□□□ 1.8
LINC00116Q8NCU8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC26.32■■□□□ 1.8
LINC00116Q8NCU8 TK2-213ENST00000563369 882 ntTSL 5 BASIC26.32■■□□□ 1.8
LINC00116Q8NCU8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LINC00116Q8NCU8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC26.32■■□□□ 1.8
LINC00116Q8NCU8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LINC00116Q8NCU8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
LINC00116Q8NCU8 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LINC00116Q8NCU8 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC26.31■■□□□ 1.8
LINC00116Q8NCU8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC26.31■■□□□ 1.8
LINC00116Q8NCU8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC26.31■■□□□ 1.8
LINC00116Q8NCU8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
LINC00116Q8NCU8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
LINC00116Q8NCU8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC26.31■■□□□ 1.8
LINC00116Q8NCU8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC26.31■■□□□ 1.8
LINC00116Q8NCU8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
LINC00116Q8NCU8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
LINC00116Q8NCU8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
LINC00116Q8NCU8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC26.31■■□□□ 1.8
LINC00116Q8NCU8 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
LINC00116Q8NCU8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
LINC00116Q8NCU8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
LINC00116Q8NCU8 AC127496.7-201ENST00000625110 1798 ntBASIC26.3■■□□□ 1.8
LINC00116Q8NCU8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LINC00116Q8NCU8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
LINC00116Q8NCU8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC26.3■■□□□ 1.8
LINC00116Q8NCU8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LINC00116Q8NCU8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC26.3■■□□□ 1.8
LINC00116Q8NCU8 RARRES2P10-201ENST00000564312 460 ntBASIC26.3■■□□□ 1.8
LINC00116Q8NCU8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC26.3■■□□□ 1.8
LINC00116Q8NCU8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC26.3■■□□□ 1.8
LINC00116Q8NCU8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.3■■□□□ 1.8
LINC00116Q8NCU8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LINC00116Q8NCU8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
LINC00116Q8NCU8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC26.3■■□□□ 1.8
LINC00116Q8NCU8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
LINC00116Q8NCU8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
LINC00116Q8NCU8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC26.29■■□□□ 1.8
LINC00116Q8NCU8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC26.29■■□□□ 1.8
LINC00116Q8NCU8 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LINC00116Q8NCU8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
LINC00116Q8NCU8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC26.29■■□□□ 1.8
LINC00116Q8NCU8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC26.29■■□□□ 1.8
LINC00116Q8NCU8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC26.29■■□□□ 1.8
LINC00116Q8NCU8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC26.29■■□□□ 1.8
LINC00116Q8NCU8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LINC00116Q8NCU8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC26.29■■□□□ 1.8
LINC00116Q8NCU8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LINC00116Q8NCU8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LINC00116Q8NCU8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC26.29■■□□□ 1.8
LINC00116Q8NCU8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
LINC00116Q8NCU8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
LINC00116Q8NCU8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
LINC00116Q8NCU8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
LINC00116Q8NCU8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.28■■□□□ 1.8
LINC00116Q8NCU8 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC26.28■■□□□ 1.8
LINC00116Q8NCU8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
LINC00116Q8NCU8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC26.28■■□□□ 1.8
LINC00116Q8NCU8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC26.28■■□□□ 1.8
LINC00116Q8NCU8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC26.28■■□□□ 1.8
LINC00116Q8NCU8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
LINC00116Q8NCU8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
LINC00116Q8NCU8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
LINC00116Q8NCU8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC26.28■■□□□ 1.8
LINC00116Q8NCU8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
LINC00116Q8NCU8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC26.28■■□□□ 1.8
LINC00116Q8NCU8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
LINC00116Q8NCU8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
LINC00116Q8NCU8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
LINC00116Q8NCU8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
LINC00116Q8NCU8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LINC00116Q8NCU8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
LINC00116Q8NCU8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
LINC00116Q8NCU8 AL353708.3-201ENST00000610272 989 ntBASIC26.27■■□□□ 1.8
LINC00116Q8NCU8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC26.27■■□□□ 1.8
LINC00116Q8NCU8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC26.27■■□□□ 1.8
LINC00116Q8NCU8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
LINC00116Q8NCU8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.26■■□□□ 1.79
LINC00116Q8NCU8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26.26■■□□□ 1.79
LINC00116Q8NCU8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
LINC00116Q8NCU8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC26.26■■□□□ 1.79
LINC00116Q8NCU8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
LINC00116Q8NCU8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
LINC00116Q8NCU8 BRWD1-AS2-201ENST00000603064 1028 ntBASIC26.26■■□□□ 1.79
LINC00116Q8NCU8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC26.26■■□□□ 1.79
LINC00116Q8NCU8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
LINC00116Q8NCU8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
LINC00116Q8NCU8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
LINC00116Q8NCU8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
LINC00116Q8NCU8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
LINC00116Q8NCU8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
LINC00116Q8NCU8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LINC00116Q8NCU8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
LINC00116Q8NCU8 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
LINC00116Q8NCU8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
LINC00116Q8NCU8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms