Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ARHGEF28Q8N1W1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ARHGEF28Q8N1W1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC28.76■■■□□ 2.19
ARHGEF28Q8N1W1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
ARHGEF28Q8N1W1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
ARHGEF28Q8N1W1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC28.76■■■□□ 2.19
ARHGEF28Q8N1W1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC28.76■■■□□ 2.19
ARHGEF28Q8N1W1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
ARHGEF28Q8N1W1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC28.76■■■□□ 2.19
ARHGEF28Q8N1W1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC28.76■■■□□ 2.19
ARHGEF28Q8N1W1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
ARHGEF28Q8N1W1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC28.76■■■□□ 2.19
ARHGEF28Q8N1W1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ARHGEF28Q8N1W1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC28.76■■■□□ 2.19
ARHGEF28Q8N1W1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
ARHGEF28Q8N1W1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
ARHGEF28Q8N1W1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
ARHGEF28Q8N1W1 AC008550.1-201ENST00000511500 884 ntBASIC28.75■■■□□ 2.19
ARHGEF28Q8N1W1 RPPH1-201ENST00000516869 333 ntBASIC28.75■■■□□ 2.19
ARHGEF28Q8N1W1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
ARHGEF28Q8N1W1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC28.75■■■□□ 2.19
ARHGEF28Q8N1W1 FAM197Y4-202ENST00000622692 608 ntBASIC28.75■■■□□ 2.19
ARHGEF28Q8N1W1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC28.75■■■□□ 2.19
ARHGEF28Q8N1W1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC28.75■■■□□ 2.19
ARHGEF28Q8N1W1 MME-217ENST00000616757 1315 ntTSL 5 BASIC28.75■■■□□ 2.19
ARHGEF28Q8N1W1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
ARHGEF28Q8N1W1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
ARHGEF28Q8N1W1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC28.74■■■□□ 2.19
ARHGEF28Q8N1W1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC28.74■■■□□ 2.19
ARHGEF28Q8N1W1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
ARHGEF28Q8N1W1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC28.74■■■□□ 2.19
ARHGEF28Q8N1W1 KRT17P3-201ENST00000420566 1262 ntBASIC28.74■■■□□ 2.19
ARHGEF28Q8N1W1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC28.74■■■□□ 2.19
ARHGEF28Q8N1W1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC28.74■■■□□ 2.19
ARHGEF28Q8N1W1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
ARHGEF28Q8N1W1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC28.74■■■□□ 2.19
ARHGEF28Q8N1W1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
ARHGEF28Q8N1W1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC28.73■■■□□ 2.19
ARHGEF28Q8N1W1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC28.73■■■□□ 2.19
ARHGEF28Q8N1W1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC28.73■■■□□ 2.19
ARHGEF28Q8N1W1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC28.73■■■□□ 2.19
ARHGEF28Q8N1W1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
ARHGEF28Q8N1W1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
ARHGEF28Q8N1W1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
ARHGEF28Q8N1W1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC28.73■■■□□ 2.19
ARHGEF28Q8N1W1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
ARHGEF28Q8N1W1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
ARHGEF28Q8N1W1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
ARHGEF28Q8N1W1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
ARHGEF28Q8N1W1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
ARHGEF28Q8N1W1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ARHGEF28Q8N1W1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
ARHGEF28Q8N1W1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC28.72■■■□□ 2.19
ARHGEF28Q8N1W1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
ARHGEF28Q8N1W1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC28.71■■■□□ 2.19
ARHGEF28Q8N1W1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC28.71■■■□□ 2.19
ARHGEF28Q8N1W1 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
ARHGEF28Q8N1W1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC28.71■■■□□ 2.19
ARHGEF28Q8N1W1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC28.71■■■□□ 2.19
ARHGEF28Q8N1W1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC28.71■■■□□ 2.19
ARHGEF28Q8N1W1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC28.71■■■□□ 2.19
ARHGEF28Q8N1W1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC28.71■■■□□ 2.19
ARHGEF28Q8N1W1 AP006294.2-201ENST00000641667 209 ntBASIC28.71■■■□□ 2.19
ARHGEF28Q8N1W1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC28.71■■■□□ 2.19
ARHGEF28Q8N1W1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
ARHGEF28Q8N1W1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
ARHGEF28Q8N1W1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
ARHGEF28Q8N1W1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.19
ARHGEF28Q8N1W1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC28.7■■■□□ 2.19
ARHGEF28Q8N1W1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
ARHGEF28Q8N1W1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
ARHGEF28Q8N1W1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
ARHGEF28Q8N1W1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC28.7■■■□□ 2.19
ARHGEF28Q8N1W1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
ARHGEF28Q8N1W1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC28.7■■■□□ 2.18
ARHGEF28Q8N1W1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC28.7■■■□□ 2.18
ARHGEF28Q8N1W1 AC244015.2-201ENST00000616358 1861 ntBASIC28.7■■■□□ 2.18
ARHGEF28Q8N1W1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
ARHGEF28Q8N1W1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC28.7■■■□□ 2.18
ARHGEF28Q8N1W1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
ARHGEF28Q8N1W1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ARHGEF28Q8N1W1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
ARHGEF28Q8N1W1 UBE2SP1-201ENST00000450587 669 ntBASIC28.69■■■□□ 2.18
ARHGEF28Q8N1W1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ARHGEF28Q8N1W1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC28.69■■■□□ 2.18
ARHGEF28Q8N1W1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC28.69■■■□□ 2.18
ARHGEF28Q8N1W1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC28.69■■■□□ 2.18
ARHGEF28Q8N1W1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ARHGEF28Q8N1W1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC28.69■■■□□ 2.18
ARHGEF28Q8N1W1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ARHGEF28Q8N1W1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
ARHGEF28Q8N1W1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
ARHGEF28Q8N1W1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
ARHGEF28Q8N1W1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ARHGEF28Q8N1W1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
ARHGEF28Q8N1W1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC28.69■■■□□ 2.18
ARHGEF28Q8N1W1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
ARHGEF28Q8N1W1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
ARHGEF28Q8N1W1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
ARHGEF28Q8N1W1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms