Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.58■□□□□ 0.73
COL27A1Q8IZC6 AC005829.2-201ENST00000571422 1056 ntBASIC19.58■□□□□ 0.73
COL27A1Q8IZC6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
COL27A1Q8IZC6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.58■□□□□ 0.73
COL27A1Q8IZC6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.58■□□□□ 0.73
COL27A1Q8IZC6 AC113410.3-201ENST00000623366 203 ntBASIC19.58■□□□□ 0.73
COL27A1Q8IZC6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.58■□□□□ 0.73
COL27A1Q8IZC6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COL27A1Q8IZC6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.58■□□□□ 0.72
COL27A1Q8IZC6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL27A1Q8IZC6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.58■□□□□ 0.72
COL27A1Q8IZC6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
COL27A1Q8IZC6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.58■□□□□ 0.72
COL27A1Q8IZC6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL27A1Q8IZC6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL27A1Q8IZC6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL27A1Q8IZC6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.58■□□□□ 0.72
COL27A1Q8IZC6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL27A1Q8IZC6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL27A1Q8IZC6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.57■□□□□ 0.72
COL27A1Q8IZC6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
COL27A1Q8IZC6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL27A1Q8IZC6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL27A1Q8IZC6 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
COL27A1Q8IZC6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL27A1Q8IZC6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.57■□□□□ 0.72
COL27A1Q8IZC6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL27A1Q8IZC6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.57■□□□□ 0.72
COL27A1Q8IZC6 AC012306.2-201ENST00000609350 630 ntBASIC19.57■□□□□ 0.72
COL27A1Q8IZC6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL27A1Q8IZC6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
COL27A1Q8IZC6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL27A1Q8IZC6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL27A1Q8IZC6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL27A1Q8IZC6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL27A1Q8IZC6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 AL023875.1-201ENST00000640777 796 ntBASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 KRASP1-201ENST00000407852 552 ntBASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL27A1Q8IZC6 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL27A1Q8IZC6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.55■□□□□ 0.72
COL27A1Q8IZC6 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
COL27A1Q8IZC6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL27A1Q8IZC6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.55■□□□□ 0.72
COL27A1Q8IZC6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
COL27A1Q8IZC6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL27A1Q8IZC6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.55■□□□□ 0.72
COL27A1Q8IZC6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL27A1Q8IZC6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL27A1Q8IZC6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
COL27A1Q8IZC6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.55■□□□□ 0.72
COL27A1Q8IZC6 AC211429.1-201ENST00000415277 523 ntBASIC19.55■□□□□ 0.72
COL27A1Q8IZC6 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.55■□□□□ 0.72
COL27A1Q8IZC6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.55■□□□□ 0.72
COL27A1Q8IZC6 C2orf69P4-201ENST00000565394 541 ntBASIC19.55■□□□□ 0.72
COL27A1Q8IZC6 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.55■□□□□ 0.72
COL27A1Q8IZC6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
COL27A1Q8IZC6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL27A1Q8IZC6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL27A1Q8IZC6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL27A1Q8IZC6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.54■□□□□ 0.72
COL27A1Q8IZC6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.54■□□□□ 0.72
COL27A1Q8IZC6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.54■□□□□ 0.72
COL27A1Q8IZC6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL27A1Q8IZC6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL27A1Q8IZC6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL27A1Q8IZC6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.54■□□□□ 0.72
COL27A1Q8IZC6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL27A1Q8IZC6 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.54■□□□□ 0.72
COL27A1Q8IZC6 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.54■□□□□ 0.72
COL27A1Q8IZC6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.54■□□□□ 0.72
COL27A1Q8IZC6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.54■□□□□ 0.72
COL27A1Q8IZC6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
COL27A1Q8IZC6 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.54■□□□□ 0.72
COL27A1Q8IZC6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.53■□□□□ 0.72
COL27A1Q8IZC6 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
COL27A1Q8IZC6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL27A1Q8IZC6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms