Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.03■□□□□ 0.64
C9orf40Q8IXQ3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.03■□□□□ 0.64
C9orf40Q8IXQ3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
C9orf40Q8IXQ3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
C9orf40Q8IXQ3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
C9orf40Q8IXQ3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 MCRIP2P1-201ENST00000394346 511 ntBASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 AL355802.2-201ENST00000402069 882 ntBASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 MIPEPP3-201ENST00000412105 444 ntBASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 AL138781.1-201ENST00000566567 1274 ntBASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 CYP2T3P-201ENST00000601990 817 ntBASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
C9orf40Q8IXQ3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
C9orf40Q8IXQ3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
C9orf40Q8IXQ3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.01■□□□□ 0.63
C9orf40Q8IXQ3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
C9orf40Q8IXQ3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.01■□□□□ 0.63
C9orf40Q8IXQ3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
C9orf40Q8IXQ3 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C9orf40Q8IXQ3 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.01■□□□□ 0.63
C9orf40Q8IXQ3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
C9orf40Q8IXQ3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C9orf40Q8IXQ3 BX276092.2-201ENST00000417668 665 ntBASIC19.01■□□□□ 0.63
C9orf40Q8IXQ3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.01■□□□□ 0.63
C9orf40Q8IXQ3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.01■□□□□ 0.63
C9orf40Q8IXQ3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.01■□□□□ 0.63
C9orf40Q8IXQ3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
C9orf40Q8IXQ3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
C9orf40Q8IXQ3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
C9orf40Q8IXQ3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C9orf40Q8IXQ3 AC027702.1-201ENST00000563810 1770 ntBASIC19.01■□□□□ 0.63
C9orf40Q8IXQ3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
C9orf40Q8IXQ3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
C9orf40Q8IXQ3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 AC142086.2-201ENST00000569753 217 ntBASIC19■□□□□ 0.63
C9orf40Q8IXQ3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 KRT17P1-201ENST00000399211 1546 ntBASIC19■□□□□ 0.63
C9orf40Q8IXQ3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19■□□□□ 0.63
C9orf40Q8IXQ3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.99■□□□□ 0.63
C9orf40Q8IXQ3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf40Q8IXQ3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
C9orf40Q8IXQ3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf40Q8IXQ3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.99■□□□□ 0.63
C9orf40Q8IXQ3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.99■□□□□ 0.63
C9orf40Q8IXQ3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
C9orf40Q8IXQ3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf40Q8IXQ3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.99■□□□□ 0.63
C9orf40Q8IXQ3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf40Q8IXQ3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.99■□□□□ 0.63
C9orf40Q8IXQ3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
C9orf40Q8IXQ3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.99■□□□□ 0.63
C9orf40Q8IXQ3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf40Q8IXQ3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C9orf40Q8IXQ3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms