Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.65■■□□□ 1.06
SCUBE3Q8IX30 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCUBE3Q8IX30 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCUBE3Q8IX30 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SCUBE3Q8IX30 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.06
SCUBE3Q8IX30 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.64■■□□□ 1.06
SCUBE3Q8IX30 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.64■■□□□ 1.06
SCUBE3Q8IX30 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SCUBE3Q8IX30 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.64■■□□□ 1.05
SCUBE3Q8IX30 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCUBE3Q8IX30 MIR663A-201ENST00000385250 93 ntBASIC21.64■■□□□ 1.05
SCUBE3Q8IX30 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
SCUBE3Q8IX30 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCUBE3Q8IX30 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.64■■□□□ 1.05
SCUBE3Q8IX30 FAM21FP-204ENST00000608637 956 ntBASIC21.64■■□□□ 1.05
SCUBE3Q8IX30 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
SCUBE3Q8IX30 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCUBE3Q8IX30 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SCUBE3Q8IX30 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCUBE3Q8IX30 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCUBE3Q8IX30 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SCUBE3Q8IX30 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SCUBE3Q8IX30 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SCUBE3Q8IX30 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.64■■□□□ 1.05
SCUBE3Q8IX30 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCUBE3Q8IX30 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCUBE3Q8IX30 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.63■■□□□ 1.05
SCUBE3Q8IX30 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.63■■□□□ 1.05
SCUBE3Q8IX30 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCUBE3Q8IX30 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCUBE3Q8IX30 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCUBE3Q8IX30 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SCUBE3Q8IX30 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCUBE3Q8IX30 RARRES2P4-201ENST00000514074 484 ntBASIC21.63■■□□□ 1.05
SCUBE3Q8IX30 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SCUBE3Q8IX30 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.63■■□□□ 1.05
SCUBE3Q8IX30 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SCUBE3Q8IX30 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCUBE3Q8IX30 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.63■■□□□ 1.05
SCUBE3Q8IX30 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCUBE3Q8IX30 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SCUBE3Q8IX30 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
SCUBE3Q8IX30 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.62■■□□□ 1.05
SCUBE3Q8IX30 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.62■■□□□ 1.05
SCUBE3Q8IX30 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCUBE3Q8IX30 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
SCUBE3Q8IX30 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCUBE3Q8IX30 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.62■■□□□ 1.05
SCUBE3Q8IX30 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.62■■□□□ 1.05
SCUBE3Q8IX30 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCUBE3Q8IX30 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.62■■□□□ 1.05
SCUBE3Q8IX30 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.62■■□□□ 1.05
SCUBE3Q8IX30 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.62■■□□□ 1.05
SCUBE3Q8IX30 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.62■■□□□ 1.05
SCUBE3Q8IX30 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SCUBE3Q8IX30 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.62■■□□□ 1.05
SCUBE3Q8IX30 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SCUBE3Q8IX30 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SCUBE3Q8IX30 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCUBE3Q8IX30 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SCUBE3Q8IX30 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCUBE3Q8IX30 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCUBE3Q8IX30 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCUBE3Q8IX30 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SCUBE3Q8IX30 AC006970.2-201ENST00000450065 779 ntBASIC21.61■■□□□ 1.05
SCUBE3Q8IX30 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SCUBE3Q8IX30 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.61■■□□□ 1.05
SCUBE3Q8IX30 AC069236.1-201ENST00000604339 616 ntBASIC21.61■■□□□ 1.05
SCUBE3Q8IX30 AC008694.1-202ENST00000636953 945 ntBASIC21.61■■□□□ 1.05
SCUBE3Q8IX30 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SCUBE3Q8IX30 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
SCUBE3Q8IX30 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCUBE3Q8IX30 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCUBE3Q8IX30 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SCUBE3Q8IX30 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SCUBE3Q8IX30 AC133552.2-202ENST00000575694 574 ntBASIC21.6■■□□□ 1.05
SCUBE3Q8IX30 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SCUBE3Q8IX30 OR10C1-204ENST00000622521 1039 ntBASIC21.6■■□□□ 1.05
SCUBE3Q8IX30 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCUBE3Q8IX30 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SCUBE3Q8IX30 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCUBE3Q8IX30 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.6■■□□□ 1.05
SCUBE3Q8IX30 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SCUBE3Q8IX30 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SCUBE3Q8IX30 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCUBE3Q8IX30 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCUBE3Q8IX30 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.59■■□□□ 1.05
SCUBE3Q8IX30 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCUBE3Q8IX30 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCUBE3Q8IX30 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.59■■□□□ 1.05
SCUBE3Q8IX30 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.59■■□□□ 1.05
SCUBE3Q8IX30 AC027702.1-201ENST00000563810 1770 ntBASIC21.59■■□□□ 1.05
SCUBE3Q8IX30 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SCUBE3Q8IX30 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCUBE3Q8IX30 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SCUBE3Q8IX30 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.59■■□□□ 1.05
SCUBE3Q8IX30 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SCUBE3Q8IX30 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.59■■□□□ 1.05
SCUBE3Q8IX30 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.59■■□□□ 1.05
SCUBE3Q8IX30 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms