Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CRLF3Q8IUI8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CRLF3Q8IUI8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.47■□□□□ 0.87
CRLF3Q8IUI8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CRLF3Q8IUI8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CRLF3Q8IUI8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CRLF3Q8IUI8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CRLF3Q8IUI8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.47■□□□□ 0.87
CRLF3Q8IUI8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CRLF3Q8IUI8 IGHV3-19-201ENST00000521488 291 ntBASIC20.47■□□□□ 0.87
CRLF3Q8IUI8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.47■□□□□ 0.87
CRLF3Q8IUI8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
CRLF3Q8IUI8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CRLF3Q8IUI8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CRLF3Q8IUI8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CRLF3Q8IUI8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CRLF3Q8IUI8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CRLF3Q8IUI8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CRLF3Q8IUI8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CRLF3Q8IUI8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 AP005435.1-201ENST00000529293 1178 ntBASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CRLF3Q8IUI8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 MIR5787-201ENST00000611784 55 ntBASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 MIR6821-201ENST00000617625 74 ntBASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.45■□□□□ 0.86
CRLF3Q8IUI8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 AC097381.1-201ENST00000429019 1296 ntBASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CRLF3Q8IUI8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CRLF3Q8IUI8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms