Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RSPH3Q86UC2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RSPH3Q86UC2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RSPH3Q86UC2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.69■■□□□ 1.22
RSPH3Q86UC2 GUSBP5-202ENST00000510805 1989 ntBASIC22.69■■□□□ 1.22
RSPH3Q86UC2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RSPH3Q86UC2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
RSPH3Q86UC2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RSPH3Q86UC2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RSPH3Q86UC2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RSPH3Q86UC2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RSPH3Q86UC2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
RSPH3Q86UC2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RSPH3Q86UC2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.67■■□□□ 1.22
RSPH3Q86UC2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RSPH3Q86UC2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RSPH3Q86UC2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.67■■□□□ 1.22
RSPH3Q86UC2 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.67■■□□□ 1.22
RSPH3Q86UC2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RSPH3Q86UC2 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RSPH3Q86UC2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RSPH3Q86UC2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 UBE2SP1-201ENST00000450587 669 ntBASIC22.66■■□□□ 1.22
RSPH3Q86UC2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 RPS2P4-201ENST00000476944 856 ntBASIC22.66■■□□□ 1.22
RSPH3Q86UC2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 AC233723.2-201ENST00000623798 2106 ntBASIC22.66■■□□□ 1.22
RSPH3Q86UC2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RSPH3Q86UC2 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RSPH3Q86UC2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RSPH3Q86UC2 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RSPH3Q86UC2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
RSPH3Q86UC2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.65■■□□□ 1.22
RSPH3Q86UC2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.65■■□□□ 1.22
RSPH3Q86UC2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RSPH3Q86UC2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RSPH3Q86UC2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
RSPH3Q86UC2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RSPH3Q86UC2 SOX15-203ENST00000570788 1093 ntBASIC22.65■■□□□ 1.22
RSPH3Q86UC2 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
RSPH3Q86UC2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22.65■■□□□ 1.22
RSPH3Q86UC2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
RSPH3Q86UC2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RSPH3Q86UC2 AC087633.2-202ENST00000565166 1439 ntBASIC22.65■■□□□ 1.22
RSPH3Q86UC2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RSPH3Q86UC2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.22
RSPH3Q86UC2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RSPH3Q86UC2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RSPH3Q86UC2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RSPH3Q86UC2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RSPH3Q86UC2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RSPH3Q86UC2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RSPH3Q86UC2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.64■■□□□ 1.21
RSPH3Q86UC2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.64■■□□□ 1.21
RSPH3Q86UC2 C2orf69P4-201ENST00000565394 541 ntBASIC22.64■■□□□ 1.21
RSPH3Q86UC2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.64■■□□□ 1.21
RSPH3Q86UC2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.64■■□□□ 1.21
RSPH3Q86UC2 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
RSPH3Q86UC2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RSPH3Q86UC2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RSPH3Q86UC2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms