Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC12.81□□□□□ -0.36
VPS13BQ7Z7G8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 AC127496.7-201ENST00000625110 1798 ntBASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC12.8□□□□□ -0.36
VPS13BQ7Z7G8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 KRT8P9-201ENST00000558927 1449 ntBASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 PRKY-204ENST00000533551 1019 ntBASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 AL023875.1-201ENST00000640777 796 ntBASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 AC133681.1-201ENST00000465482 601 ntBASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
VPS13BQ7Z7G8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 AC239809.2-201ENST00000415381 517 ntBASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 AP001412.1-201ENST00000608405 714 ntBASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
VPS13BQ7Z7G8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 642.2 ms