Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 AL589743.5-201ENST00000616611 1050 ntBASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 FAM197Y4-202ENST00000622692 608 ntBASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
RAI1Q7Z5J4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 POM121L13P-201ENST00000422362 380 ntBASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 C1QBPP2-201ENST00000528754 825 ntBASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.65■□□□□ 0.42
RAI1Q7Z5J4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAI1Q7Z5J4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAI1Q7Z5J4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAI1Q7Z5J4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.64■□□□□ 0.42
RAI1Q7Z5J4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.64■□□□□ 0.42
RAI1Q7Z5J4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAI1Q7Z5J4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
RAI1Q7Z5J4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAI1Q7Z5J4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 KRT17P3-201ENST00000420566 1262 ntBASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 RPS2P4-201ENST00000476944 856 ntBASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.64■□□□□ 0.41
RAI1Q7Z5J4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RAI1Q7Z5J4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAI1Q7Z5J4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.63■□□□□ 0.41
RAI1Q7Z5J4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
RAI1Q7Z5J4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAI1Q7Z5J4 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAI1Q7Z5J4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RAI1Q7Z5J4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAI1Q7Z5J4 RPPH1-201ENST00000516869 333 ntBASIC17.63■□□□□ 0.41
RAI1Q7Z5J4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.63■□□□□ 0.41
RAI1Q7Z5J4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.63■□□□□ 0.41
RAI1Q7Z5J4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAI1Q7Z5J4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAI1Q7Z5J4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAI1Q7Z5J4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAI1Q7Z5J4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAI1Q7Z5J4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAI1Q7Z5J4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.63■□□□□ 0.41
RAI1Q7Z5J4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAI1Q7Z5J4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAI1Q7Z5J4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RAI1Q7Z5J4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.62■□□□□ 0.41
RAI1Q7Z5J4 AC012618.2-201ENST00000428058 849 ntBASIC17.62■□□□□ 0.41
RAI1Q7Z5J4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.62■□□□□ 0.41
RAI1Q7Z5J4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RAI1Q7Z5J4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.62■□□□□ 0.41
RAI1Q7Z5J4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAI1Q7Z5J4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAI1Q7Z5J4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RAI1Q7Z5J4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.62■□□□□ 0.41
RAI1Q7Z5J4 CYP21A1P-202ENST00000354927 1481 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms