Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF44Q7L0R7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF44Q7L0R7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF44Q7L0R7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF44Q7L0R7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF44Q7L0R7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RNF44Q7L0R7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF44Q7L0R7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF44Q7L0R7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF44Q7L0R7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF44Q7L0R7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF44Q7L0R7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF44Q7L0R7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF44Q7L0R7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.72■□□□□ 0.75
RNF44Q7L0R7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF44Q7L0R7 AC100791.3-201ENST00000617619 330 ntBASIC19.72■□□□□ 0.75
RNF44Q7L0R7 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF44Q7L0R7 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.72■□□□□ 0.75
RNF44Q7L0R7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF44Q7L0R7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF44Q7L0R7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF44Q7L0R7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF44Q7L0R7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF44Q7L0R7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 MKRN4P-201ENST00000444706 1521 ntBASIC19.71■□□□□ 0.75
RNF44Q7L0R7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 AC010980.2-201ENST00000587099 1412 ntBASIC19.71■□□□□ 0.75
RNF44Q7L0R7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 SLC29A4P1-201ENST00000398760 971 ntBASIC19.71■□□□□ 0.75
RNF44Q7L0R7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF44Q7L0R7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF44Q7L0R7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF44Q7L0R7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF44Q7L0R7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF44Q7L0R7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF44Q7L0R7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RNF44Q7L0R7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.7■□□□□ 0.74
RNF44Q7L0R7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.7■□□□□ 0.74
RNF44Q7L0R7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF44Q7L0R7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF44Q7L0R7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF44Q7L0R7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF44Q7L0R7 AC011484.1-201ENST00000377652 1995 ntBASIC19.7■□□□□ 0.74
RNF44Q7L0R7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF44Q7L0R7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF44Q7L0R7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
RNF44Q7L0R7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF44Q7L0R7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF44Q7L0R7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF44Q7L0R7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RNF44Q7L0R7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF44Q7L0R7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF44Q7L0R7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
RNF44Q7L0R7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF44Q7L0R7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF44Q7L0R7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
RNF44Q7L0R7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RNF44Q7L0R7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF44Q7L0R7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF44Q7L0R7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF44Q7L0R7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.69■□□□□ 0.74
RNF44Q7L0R7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RNF44Q7L0R7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.68■□□□□ 0.74
RNF44Q7L0R7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms