Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
C9orf139Q6ZV77 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf139Q6ZV77 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf139Q6ZV77 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
C9orf139Q6ZV77 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.63■□□□□ 0.25
C9orf139Q6ZV77 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf139Q6ZV77 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf139Q6ZV77 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf139Q6ZV77 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
C9orf139Q6ZV77 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf139Q6ZV77 AC008403.3-201ENST00000598924 454 ntBASIC16.63■□□□□ 0.25
C9orf139Q6ZV77 AC073648.6-201ENST00000641589 218 ntBASIC16.63■□□□□ 0.25
C9orf139Q6ZV77 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
C9orf139Q6ZV77 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.63■□□□□ 0.25
C9orf139Q6ZV77 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf139Q6ZV77 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
C9orf139Q6ZV77 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.63■□□□□ 0.25
C9orf139Q6ZV77 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
C9orf139Q6ZV77 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
C9orf139Q6ZV77 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 UNC93B4-201ENST00000505679 747 ntBASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.62■□□□□ 0.25
C9orf139Q6ZV77 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 AC092368.3-202ENST00000574180 1591 ntBASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 PGM5P4-201ENST00000421970 445 ntBASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 AC142381.4-202ENST00000563973 229 ntBASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 AC087633.2-202ENST00000565166 1439 ntBASIC16.61■□□□□ 0.25
C9orf139Q6ZV77 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
C9orf139Q6ZV77 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C9orf139Q6ZV77 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
C9orf139Q6ZV77 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C9orf139Q6ZV77 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
C9orf139Q6ZV77 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C9orf139Q6ZV77 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
C9orf139Q6ZV77 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
C9orf139Q6ZV77 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
C9orf139Q6ZV77 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.6■□□□□ 0.25
C9orf139Q6ZV77 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
C9orf139Q6ZV77 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C9orf139Q6ZV77 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.6■□□□□ 0.25
C9orf139Q6ZV77 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
C9orf139Q6ZV77 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
C9orf139Q6ZV77 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms