Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.46■■□□□ 1.19
FOXR2Q6PJQ5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
FOXR2Q6PJQ5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
FOXR2Q6PJQ5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.46■■□□□ 1.19
FOXR2Q6PJQ5 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.46■■□□□ 1.19
FOXR2Q6PJQ5 AC034268.1-201ENST00000441047 882 ntBASIC22.46■■□□□ 1.19
FOXR2Q6PJQ5 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.46■■□□□ 1.19
FOXR2Q6PJQ5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
FOXR2Q6PJQ5 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
FOXR2Q6PJQ5 KRT8P36-201ENST00000489121 1440 ntBASIC22.46■■□□□ 1.19
FOXR2Q6PJQ5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
FOXR2Q6PJQ5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
FOXR2Q6PJQ5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
FOXR2Q6PJQ5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
FOXR2Q6PJQ5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.46■■□□□ 1.19
FOXR2Q6PJQ5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
FOXR2Q6PJQ5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
FOXR2Q6PJQ5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
FOXR2Q6PJQ5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
FOXR2Q6PJQ5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.45■■□□□ 1.19
FOXR2Q6PJQ5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
FOXR2Q6PJQ5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
FOXR2Q6PJQ5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
FOXR2Q6PJQ5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
FOXR2Q6PJQ5 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.45■■□□□ 1.18
FOXR2Q6PJQ5 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.45■■□□□ 1.18
FOXR2Q6PJQ5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
FOXR2Q6PJQ5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.45■■□□□ 1.18
FOXR2Q6PJQ5 AL162412.1-201ENST00000567129 965 ntBASIC22.45■■□□□ 1.18
FOXR2Q6PJQ5 UBE2DNL-204ENST00000602536 740 ntBASIC22.45■■□□□ 1.18
FOXR2Q6PJQ5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
FOXR2Q6PJQ5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
FOXR2Q6PJQ5 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
FOXR2Q6PJQ5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.45■■□□□ 1.18
FOXR2Q6PJQ5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.45■■□□□ 1.18
FOXR2Q6PJQ5 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
FOXR2Q6PJQ5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
FOXR2Q6PJQ5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.45■■□□□ 1.18
FOXR2Q6PJQ5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
FOXR2Q6PJQ5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
FOXR2Q6PJQ5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
FOXR2Q6PJQ5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.44■■□□□ 1.18
FOXR2Q6PJQ5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
FOXR2Q6PJQ5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
FOXR2Q6PJQ5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
FOXR2Q6PJQ5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.44■■□□□ 1.18
FOXR2Q6PJQ5 CDV3P1-201ENST00000471403 739 ntBASIC22.44■■□□□ 1.18
FOXR2Q6PJQ5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.44■■□□□ 1.18
FOXR2Q6PJQ5 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.44■■□□□ 1.18
FOXR2Q6PJQ5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.44■■□□□ 1.18
FOXR2Q6PJQ5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
FOXR2Q6PJQ5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
FOXR2Q6PJQ5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
FOXR2Q6PJQ5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
FOXR2Q6PJQ5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
FOXR2Q6PJQ5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
FOXR2Q6PJQ5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.43■■□□□ 1.18
FOXR2Q6PJQ5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.43■■□□□ 1.18
FOXR2Q6PJQ5 NTF6G-201ENST00000591094 616 ntBASIC22.43■■□□□ 1.18
FOXR2Q6PJQ5 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
FOXR2Q6PJQ5 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
FOXR2Q6PJQ5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
FOXR2Q6PJQ5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
FOXR2Q6PJQ5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.43■■□□□ 1.18
FOXR2Q6PJQ5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 AC007322.4-201ENST00000509611 723 ntBASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 FAM21FP-204ENST00000608637 956 ntBASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
FOXR2Q6PJQ5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
FOXR2Q6PJQ5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.41■■□□□ 1.18
FOXR2Q6PJQ5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
FOXR2Q6PJQ5 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
FOXR2Q6PJQ5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
FOXR2Q6PJQ5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
FOXR2Q6PJQ5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.41■■□□□ 1.18
FOXR2Q6PJQ5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
FOXR2Q6PJQ5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.41■■□□□ 1.18
FOXR2Q6PJQ5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.41■■□□□ 1.18
FOXR2Q6PJQ5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
FOXR2Q6PJQ5 KRT18P11-201ENST00000435214 1283 ntBASIC22.41■■□□□ 1.18
FOXR2Q6PJQ5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.41■■□□□ 1.18
FOXR2Q6PJQ5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
FOXR2Q6PJQ5 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms