Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PPP4R3AQ6IN85 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.39■■□□□ 1.33
PPP4R3AQ6IN85 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.39■■□□□ 1.33
PPP4R3AQ6IN85 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PPP4R3AQ6IN85 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.39■■□□□ 1.33
PPP4R3AQ6IN85 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
PPP4R3AQ6IN85 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
PPP4R3AQ6IN85 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
PPP4R3AQ6IN85 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
PPP4R3AQ6IN85 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 AC090192.1-201ENST00000517740 490 ntBASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 AC133552.2-202ENST00000575694 574 ntBASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 OR10C1-204ENST00000622521 1039 ntBASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PPP4R3AQ6IN85 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.37■■□□□ 1.33
PPP4R3AQ6IN85 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.37■■□□□ 1.33
PPP4R3AQ6IN85 MIR663A-201ENST00000385250 93 ntBASIC23.37■■□□□ 1.33
PPP4R3AQ6IN85 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.37■■□□□ 1.33
PPP4R3AQ6IN85 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
PPP4R3AQ6IN85 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
PPP4R3AQ6IN85 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
PPP4R3AQ6IN85 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.37■■□□□ 1.33
PPP4R3AQ6IN85 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.37■■□□□ 1.33
PPP4R3AQ6IN85 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
PPP4R3AQ6IN85 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
PPP4R3AQ6IN85 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PPP4R3AQ6IN85 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PPP4R3AQ6IN85 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PPP4R3AQ6IN85 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.36■■□□□ 1.33
PPP4R3AQ6IN85 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.36■■□□□ 1.33
PPP4R3AQ6IN85 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.36■■□□□ 1.33
PPP4R3AQ6IN85 AC069236.1-201ENST00000604339 616 ntBASIC23.36■■□□□ 1.33
PPP4R3AQ6IN85 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.36■■□□□ 1.33
PPP4R3AQ6IN85 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PPP4R3AQ6IN85 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PPP4R3AQ6IN85 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PPP4R3AQ6IN85 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PPP4R3AQ6IN85 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
PPP4R3AQ6IN85 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
PPP4R3AQ6IN85 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC23.35■■□□□ 1.33
PPP4R3AQ6IN85 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PPP4R3AQ6IN85 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.35■■□□□ 1.33
PPP4R3AQ6IN85 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23.35■■□□□ 1.33
PPP4R3AQ6IN85 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PPP4R3AQ6IN85 AL512625.2-201ENST00000417533 625 ntBASIC23.35■■□□□ 1.33
PPP4R3AQ6IN85 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PPP4R3AQ6IN85 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
PPP4R3AQ6IN85 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PPP4R3AQ6IN85 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.35■■□□□ 1.33
PPP4R3AQ6IN85 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PPP4R3AQ6IN85 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
PPP4R3AQ6IN85 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PPP4R3AQ6IN85 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
PPP4R3AQ6IN85 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
PPP4R3AQ6IN85 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.34■■□□□ 1.33
PPP4R3AQ6IN85 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PPP4R3AQ6IN85 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.34■■□□□ 1.33
PPP4R3AQ6IN85 AC100791.3-201ENST00000617619 330 ntBASIC23.34■■□□□ 1.33
PPP4R3AQ6IN85 AC008694.1-202ENST00000636953 945 ntBASIC23.34■■□□□ 1.33
PPP4R3AQ6IN85 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PPP4R3AQ6IN85 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PPP4R3AQ6IN85 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PPP4R3AQ6IN85 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PPP4R3AQ6IN85 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
PPP4R3AQ6IN85 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PPP4R3AQ6IN85 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.33■■□□□ 1.33
PPP4R3AQ6IN85 AC027702.1-201ENST00000563810 1770 ntBASIC23.33■■□□□ 1.33
PPP4R3AQ6IN85 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PPP4R3AQ6IN85 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
PPP4R3AQ6IN85 AC006128.1-201ENST00000624704 1661 ntBASIC23.33■■□□□ 1.33
PPP4R3AQ6IN85 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PPP4R3AQ6IN85 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.33■■□□□ 1.33
PPP4R3AQ6IN85 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.33■■□□□ 1.33
PPP4R3AQ6IN85 AC006970.2-201ENST00000450065 779 ntBASIC23.33■■□□□ 1.33
PPP4R3AQ6IN85 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.33■■□□□ 1.33
PPP4R3AQ6IN85 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PPP4R3AQ6IN85 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.33■■□□□ 1.32
PPP4R3AQ6IN85 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PPP4R3AQ6IN85 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.32■■□□□ 1.32
PPP4R3AQ6IN85 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R3AQ6IN85 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R3AQ6IN85 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R3AQ6IN85 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R3AQ6IN85 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms