Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF43Q68DV7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF43Q68DV7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF43Q68DV7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF43Q68DV7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF43Q68DV7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF43Q68DV7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF43Q68DV7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.53■■□□□ 1.04
RNF43Q68DV7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF43Q68DV7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
RNF43Q68DV7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF43Q68DV7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF43Q68DV7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.53■■□□□ 1.04
RNF43Q68DV7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.53■■□□□ 1.04
RNF43Q68DV7 AL162412.1-201ENST00000567129 965 ntBASIC21.53■■□□□ 1.04
RNF43Q68DV7 AC008687.6-201ENST00000596318 630 ntBASIC21.53■■□□□ 1.04
RNF43Q68DV7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF43Q68DV7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RNF43Q68DV7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.53■■□□□ 1.04
RNF43Q68DV7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF43Q68DV7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF43Q68DV7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF43Q68DV7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF43Q68DV7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RNF43Q68DV7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF43Q68DV7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.52■■□□□ 1.04
RNF43Q68DV7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF43Q68DV7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.52■■□□□ 1.04
RNF43Q68DV7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF43Q68DV7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF43Q68DV7 AC069152.1-201ENST00000438030 544 ntBASIC21.52■■□□□ 1.04
RNF43Q68DV7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF43Q68DV7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF43Q68DV7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RNF43Q68DV7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
RNF43Q68DV7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RNF43Q68DV7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF43Q68DV7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF43Q68DV7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.52■■□□□ 1.04
RNF43Q68DV7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF43Q68DV7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RNF43Q68DV7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.52■■□□□ 1.03
RNF43Q68DV7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RNF43Q68DV7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF43Q68DV7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF43Q68DV7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF43Q68DV7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF43Q68DV7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF43Q68DV7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RNF43Q68DV7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
RNF43Q68DV7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
RNF43Q68DV7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.51■■□□□ 1.03
RNF43Q68DV7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF43Q68DV7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF43Q68DV7 AC133041.1-202ENST00000642053 222 ntBASIC21.51■■□□□ 1.03
RNF43Q68DV7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF43Q68DV7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF43Q68DV7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF43Q68DV7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF43Q68DV7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF43Q68DV7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF43Q68DV7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF43Q68DV7 Z98882.1-201ENST00000622160 2253 ntBASIC21.5■■□□□ 1.03
RNF43Q68DV7 FEM1AP4-201ENST00000443167 1987 ntBASIC21.5■■□□□ 1.03
RNF43Q68DV7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF43Q68DV7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF43Q68DV7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
RNF43Q68DV7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF43Q68DV7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF43Q68DV7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF43Q68DV7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RNF43Q68DV7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF43Q68DV7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.5■■□□□ 1.03
RNF43Q68DV7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.5■■□□□ 1.03
RNF43Q68DV7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.5■■□□□ 1.03
RNF43Q68DV7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.5■■□□□ 1.03
RNF43Q68DV7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF43Q68DV7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.5■■□□□ 1.03
RNF43Q68DV7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.5■■□□□ 1.03
RNF43Q68DV7 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.5■■□□□ 1.03
RNF43Q68DV7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF43Q68DV7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF43Q68DV7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RNF43Q68DV7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.5■■□□□ 1.03
RNF43Q68DV7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
RNF43Q68DV7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF43Q68DV7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.49■■□□□ 1.03
RNF43Q68DV7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF43Q68DV7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.49■■□□□ 1.03
RNF43Q68DV7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF43Q68DV7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF43Q68DV7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF43Q68DV7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF43Q68DV7 CYP2T1P-201ENST00000432607 1285 ntBASIC21.49■■□□□ 1.03
RNF43Q68DV7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF43Q68DV7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
RNF43Q68DV7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RNF43Q68DV7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.48■■□□□ 1.03
RNF43Q68DV7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.48■■□□□ 1.03
RNF43Q68DV7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms