Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC31.47■■■□□ 2.63
CDC42BPAQ5VT25 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC31.47■■■□□ 2.63
CDC42BPAQ5VT25 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC31.46■■■□□ 2.63
CDC42BPAQ5VT25 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
CDC42BPAQ5VT25 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CDC42BPAQ5VT25 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CDC42BPAQ5VT25 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CDC42BPAQ5VT25 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC31.46■■■□□ 2.63
CDC42BPAQ5VT25 AL049637.2-201ENST00000641778 930 ntBASIC31.46■■■□□ 2.63
CDC42BPAQ5VT25 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC31.46■■■□□ 2.63
CDC42BPAQ5VT25 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CDC42BPAQ5VT25 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CDC42BPAQ5VT25 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC31.46■■■□□ 2.63
CDC42BPAQ5VT25 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CDC42BPAQ5VT25 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CDC42BPAQ5VT25 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC31.46■■■□□ 2.63
CDC42BPAQ5VT25 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CDC42BPAQ5VT25 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CDC42BPAQ5VT25 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CDC42BPAQ5VT25 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.63
CDC42BPAQ5VT25 RER1-204ENST00000378518 522 ntTSL 3 BASIC31.45■■■□□ 2.63
CDC42BPAQ5VT25 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC31.45■■■□□ 2.63
CDC42BPAQ5VT25 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CDC42BPAQ5VT25 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.62
CDC42BPAQ5VT25 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
CDC42BPAQ5VT25 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CDC42BPAQ5VT25 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CDC42BPAQ5VT25 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
CDC42BPAQ5VT25 PGM5P4-201ENST00000421970 445 ntBASIC31.44■■■□□ 2.62
CDC42BPAQ5VT25 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CDC42BPAQ5VT25 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC31.44■■■□□ 2.62
CDC42BPAQ5VT25 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
CDC42BPAQ5VT25 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC31.44■■■□□ 2.62
CDC42BPAQ5VT25 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CDC42BPAQ5VT25 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC31.44■■■□□ 2.62
CDC42BPAQ5VT25 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CDC42BPAQ5VT25 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC31.44■■■□□ 2.62
CDC42BPAQ5VT25 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC31.43■■■□□ 2.62
CDC42BPAQ5VT25 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC31.43■■■□□ 2.62
CDC42BPAQ5VT25 KRASP1-201ENST00000407852 552 ntBASIC31.43■■■□□ 2.62
CDC42BPAQ5VT25 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
CDC42BPAQ5VT25 AC113410.3-201ENST00000623366 203 ntBASIC31.43■■■□□ 2.62
CDC42BPAQ5VT25 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
CDC42BPAQ5VT25 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
CDC42BPAQ5VT25 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDC42BPAQ5VT25 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDC42BPAQ5VT25 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CDC42BPAQ5VT25 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
CDC42BPAQ5VT25 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDC42BPAQ5VT25 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CDC42BPAQ5VT25 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
CDC42BPAQ5VT25 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
CDC42BPAQ5VT25 AL023875.1-201ENST00000640777 796 ntBASIC31.42■■■□□ 2.62
CDC42BPAQ5VT25 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDC42BPAQ5VT25 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CDC42BPAQ5VT25 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CDC42BPAQ5VT25 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CDC42BPAQ5VT25 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CDC42BPAQ5VT25 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CDC42BPAQ5VT25 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC31.41■■■□□ 2.62
CDC42BPAQ5VT25 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC31.41■■■□□ 2.62
CDC42BPAQ5VT25 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
CDC42BPAQ5VT25 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CDC42BPAQ5VT25 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CDC42BPAQ5VT25 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC31.41■■■□□ 2.62
CDC42BPAQ5VT25 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CDC42BPAQ5VT25 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CDC42BPAQ5VT25 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
CDC42BPAQ5VT25 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC31.41■■■□□ 2.62
CDC42BPAQ5VT25 MFF-203ENST00000349901 1716 ntTSL 2 BASIC31.4■■■□□ 2.62
CDC42BPAQ5VT25 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CDC42BPAQ5VT25 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CDC42BPAQ5VT25 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
CDC42BPAQ5VT25 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
CDC42BPAQ5VT25 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC31.4■■■□□ 2.62
CDC42BPAQ5VT25 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC31.4■■■□□ 2.62
CDC42BPAQ5VT25 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC31.4■■■□□ 2.62
CDC42BPAQ5VT25 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC31.4■■■□□ 2.62
CDC42BPAQ5VT25 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
CDC42BPAQ5VT25 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC31.39■■■□□ 2.62
CDC42BPAQ5VT25 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
CDC42BPAQ5VT25 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CDC42BPAQ5VT25 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
CDC42BPAQ5VT25 SNX21-213ENST00000614929 587 ntTSL 5 BASIC31.39■■■□□ 2.62
CDC42BPAQ5VT25 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC31.39■■■□□ 2.62
CDC42BPAQ5VT25 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
CDC42BPAQ5VT25 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC31.39■■■□□ 2.61
CDC42BPAQ5VT25 AC242852.2-201ENST00000615738 1807 ntBASIC31.39■■■□□ 2.61
CDC42BPAQ5VT25 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC31.38■■■□□ 2.61
CDC42BPAQ5VT25 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC31.38■■■□□ 2.61
CDC42BPAQ5VT25 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC31.38■■■□□ 2.61
CDC42BPAQ5VT25 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CDC42BPAQ5VT25 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
CDC42BPAQ5VT25 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CDC42BPAQ5VT25 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CDC42BPAQ5VT25 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
CDC42BPAQ5VT25 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
CDC42BPAQ5VT25 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CDC42BPAQ5VT25 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
CDC42BPAQ5VT25 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC31.38■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms