Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC009078.2-202ENST00000463353 338 ntBASIC23.55■■□□□ 1.36
COL13A1Q5TAT6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC23.55■■□□□ 1.36
COL13A1Q5TAT6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.55■■□□□ 1.36
COL13A1Q5TAT6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
COL13A1Q5TAT6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
COL13A1Q5TAT6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
COL13A1Q5TAT6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
COL13A1Q5TAT6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.54■■□□□ 1.36
COL13A1Q5TAT6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL13A1Q5TAT6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL13A1Q5TAT6 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL13A1Q5TAT6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL13A1Q5TAT6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL13A1Q5TAT6 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL13A1Q5TAT6 KRT18P13-201ENST00000400056 1290 ntBASIC23.54■■□□□ 1.36
COL13A1Q5TAT6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC23.54■■□□□ 1.36
COL13A1Q5TAT6 YBX1P2-201ENST00000489612 999 ntBASIC23.54■■□□□ 1.36
COL13A1Q5TAT6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
COL13A1Q5TAT6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC23.54■■□□□ 1.36
COL13A1Q5TAT6 SLC25A1P4-201ENST00000567977 778 ntBASIC23.54■■□□□ 1.36
COL13A1Q5TAT6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL13A1Q5TAT6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
COL13A1Q5TAT6 AC079630.1-202ENST00000618127 1840 ntBASIC23.54■■□□□ 1.36
COL13A1Q5TAT6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL13A1Q5TAT6 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL13A1Q5TAT6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL13A1Q5TAT6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL13A1Q5TAT6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL13A1Q5TAT6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
COL13A1Q5TAT6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
COL13A1Q5TAT6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
COL13A1Q5TAT6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
COL13A1Q5TAT6 EGLN1P1-201ENST00000531623 762 ntBASIC23.53■■□□□ 1.36
COL13A1Q5TAT6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC23.53■■□□□ 1.36
COL13A1Q5TAT6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC23.53■■□□□ 1.36
COL13A1Q5TAT6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
COL13A1Q5TAT6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC23.53■■□□□ 1.36
COL13A1Q5TAT6 AC004264.1-201ENST00000608354 794 ntBASIC23.53■■□□□ 1.36
COL13A1Q5TAT6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
COL13A1Q5TAT6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL13A1Q5TAT6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL13A1Q5TAT6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL13A1Q5TAT6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
COL13A1Q5TAT6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC23.52■■□□□ 1.36
COL13A1Q5TAT6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL13A1Q5TAT6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL13A1Q5TAT6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL13A1Q5TAT6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL13A1Q5TAT6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
COL13A1Q5TAT6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC23.52■■□□□ 1.36
COL13A1Q5TAT6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC23.52■■□□□ 1.36
COL13A1Q5TAT6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.52■■□□□ 1.36
COL13A1Q5TAT6 C2orf69P3-201ENST00000565542 1120 ntBASIC23.52■■□□□ 1.36
COL13A1Q5TAT6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL13A1Q5TAT6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.52■■□□□ 1.36
COL13A1Q5TAT6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.52■■□□□ 1.36
COL13A1Q5TAT6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
COL13A1Q5TAT6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
COL13A1Q5TAT6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL13A1Q5TAT6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL13A1Q5TAT6 AL671277.2-201ENST00000458060 996 ntBASIC23.51■■□□□ 1.35
COL13A1Q5TAT6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC23.51■■□□□ 1.35
COL13A1Q5TAT6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL13A1Q5TAT6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC23.51■■□□□ 1.35
COL13A1Q5TAT6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC23.51■■□□□ 1.35
COL13A1Q5TAT6 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL13A1Q5TAT6 FAM87A-204ENST00000613235 858 ntBASIC23.51■■□□□ 1.35
COL13A1Q5TAT6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC23.51■■□□□ 1.35
COL13A1Q5TAT6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL13A1Q5TAT6 AL353803.4-201ENST00000565882 1934 ntBASIC23.51■■□□□ 1.35
COL13A1Q5TAT6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.5■■□□□ 1.35
COL13A1Q5TAT6 LINC00543-201ENST00000567234 1845 ntBASIC23.5■■□□□ 1.35
COL13A1Q5TAT6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL13A1Q5TAT6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.5■■□□□ 1.35
COL13A1Q5TAT6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC23.5■■□□□ 1.35
COL13A1Q5TAT6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL13A1Q5TAT6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC23.5■■□□□ 1.35
COL13A1Q5TAT6 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC23.5■■□□□ 1.35
COL13A1Q5TAT6 AC079089.2-201ENST00000531211 1277 ntBASIC23.5■■□□□ 1.35
COL13A1Q5TAT6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC23.5■■□□□ 1.35
COL13A1Q5TAT6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.5■■□□□ 1.35
COL13A1Q5TAT6 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
COL13A1Q5TAT6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.5■■□□□ 1.35
COL13A1Q5TAT6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL13A1Q5TAT6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL13A1Q5TAT6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL13A1Q5TAT6 TSPY14P-201ENST00000303979 915 ntBASIC23.49■■□□□ 1.35
COL13A1Q5TAT6 FAAHP1-202ENST00000446499 1238 ntBASIC23.49■■□□□ 1.35
COL13A1Q5TAT6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC23.49■■□□□ 1.35
COL13A1Q5TAT6 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC23.49■■□□□ 1.35
COL13A1Q5TAT6 AC008622.2-201ENST00000617006 1229 ntBASIC23.49■■□□□ 1.35
COL13A1Q5TAT6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL13A1Q5TAT6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL13A1Q5TAT6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL13A1Q5TAT6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
COL13A1Q5TAT6 AC135731.1-201ENST00000569415 2548 ntBASIC23.48■■□□□ 1.35
COL13A1Q5TAT6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL13A1Q5TAT6 INGX-201ENST00000359239 846 ntBASIC23.48■■□□□ 1.35
COL13A1Q5TAT6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.48■■□□□ 1.35
COL13A1Q5TAT6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms