Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.59■□□□□ 0.57
RNFT1Q5M7Z0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNFT1Q5M7Z0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.59■□□□□ 0.57
RNFT1Q5M7Z0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
RNFT1Q5M7Z0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNFT1Q5M7Z0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.59■□□□□ 0.57
RNFT1Q5M7Z0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNFT1Q5M7Z0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.59■□□□□ 0.57
RNFT1Q5M7Z0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.58■□□□□ 0.57
RNFT1Q5M7Z0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
RNFT1Q5M7Z0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.58■□□□□ 0.57
RNFT1Q5M7Z0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.58■□□□□ 0.57
RNFT1Q5M7Z0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNFT1Q5M7Z0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNFT1Q5M7Z0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
RNFT1Q5M7Z0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNFT1Q5M7Z0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 UNC93B4-201ENST00000505679 747 ntBASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 EP400NL-214ENST00000641289 2402 ntBASIC18.58■□□□□ 0.56
RNFT1Q5M7Z0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNFT1Q5M7Z0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNFT1Q5M7Z0 AL117328.2-201ENST00000624617 1940 ntBASIC18.57■□□□□ 0.56
RNFT1Q5M7Z0 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNFT1Q5M7Z0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.57■□□□□ 0.56
RNFT1Q5M7Z0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
RNFT1Q5M7Z0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNFT1Q5M7Z0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RNFT1Q5M7Z0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.57■□□□□ 0.56
RNFT1Q5M7Z0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.57■□□□□ 0.56
RNFT1Q5M7Z0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RNFT1Q5M7Z0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.57■□□□□ 0.56
RNFT1Q5M7Z0 AC087633.2-202ENST00000565166 1439 ntBASIC18.57■□□□□ 0.56
RNFT1Q5M7Z0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.56■□□□□ 0.56
RNFT1Q5M7Z0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNFT1Q5M7Z0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNFT1Q5M7Z0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RNFT1Q5M7Z0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNFT1Q5M7Z0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNFT1Q5M7Z0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNFT1Q5M7Z0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNFT1Q5M7Z0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNFT1Q5M7Z0 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.56■□□□□ 0.56
RNFT1Q5M7Z0 C2orf69P4-201ENST00000565394 541 ntBASIC18.56■□□□□ 0.56
RNFT1Q5M7Z0 AC233263.1-201ENST00000578059 224 ntBASIC18.56■□□□□ 0.56
RNFT1Q5M7Z0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RNFT1Q5M7Z0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.56■□□□□ 0.56
RNFT1Q5M7Z0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNFT1Q5M7Z0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNFT1Q5M7Z0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RNFT1Q5M7Z0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RNFT1Q5M7Z0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.56■□□□□ 0.56
RNFT1Q5M7Z0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 SOX15-203ENST00000570788 1093 ntBASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.55■□□□□ 0.56
RNFT1Q5M7Z0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNFT1Q5M7Z0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.54■□□□□ 0.56
RNFT1Q5M7Z0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNFT1Q5M7Z0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.54■□□□□ 0.56
RNFT1Q5M7Z0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNFT1Q5M7Z0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNFT1Q5M7Z0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNFT1Q5M7Z0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms