Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDCD4Q53EL6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
PDCD4Q53EL6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PDCD4Q53EL6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDCD4Q53EL6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PDCD4Q53EL6 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDCD4Q53EL6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.73■□□□□ 0.75
PDCD4Q53EL6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDCD4Q53EL6 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.73■□□□□ 0.75
PDCD4Q53EL6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PDCD4Q53EL6 AC099778.1-201ENST00000568593 1911 ntBASIC19.73■□□□□ 0.75
PDCD4Q53EL6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
PDCD4Q53EL6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.73■□□□□ 0.75
PDCD4Q53EL6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.73■□□□□ 0.75
PDCD4Q53EL6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.73■□□□□ 0.75
PDCD4Q53EL6 AP001330.3-201ENST00000520123 633 ntBASIC19.73■□□□□ 0.75
PDCD4Q53EL6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.73■□□□□ 0.75
PDCD4Q53EL6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
PDCD4Q53EL6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDCD4Q53EL6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDCD4Q53EL6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PDCD4Q53EL6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDCD4Q53EL6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDCD4Q53EL6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 AFG3L1P-217ENST00000557444 2447 ntBASIC19.72■□□□□ 0.75
PDCD4Q53EL6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PDCD4Q53EL6 AL020996.1-203ENST00000536896 2307 ntBASIC19.71■□□□□ 0.75
PDCD4Q53EL6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.71■□□□□ 0.75
PDCD4Q53EL6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD4Q53EL6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD4Q53EL6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD4Q53EL6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD4Q53EL6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.71■□□□□ 0.75
PDCD4Q53EL6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD4Q53EL6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.71■□□□□ 0.75
PDCD4Q53EL6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PDCD4Q53EL6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.71■□□□□ 0.75
PDCD4Q53EL6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD4Q53EL6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD4Q53EL6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD4Q53EL6 AC012414.1-201ENST00000556676 535 ntBASIC19.71■□□□□ 0.75
PDCD4Q53EL6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD4Q53EL6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD4Q53EL6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD4Q53EL6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
PDCD4Q53EL6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD4Q53EL6 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PDCD4Q53EL6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDCD4Q53EL6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.7■□□□□ 0.74
PDCD4Q53EL6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDCD4Q53EL6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.7■□□□□ 0.74
PDCD4Q53EL6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDCD4Q53EL6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.7■□□□□ 0.74
PDCD4Q53EL6 EDA-201ENST00000338901 1233 ntBASIC19.7■□□□□ 0.74
PDCD4Q53EL6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.7■□□□□ 0.74
PDCD4Q53EL6 PBX2P1-201ENST00000493219 1291 ntBASIC19.7■□□□□ 0.74
PDCD4Q53EL6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.7■□□□□ 0.74
PDCD4Q53EL6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.7■□□□□ 0.74
PDCD4Q53EL6 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.7■□□□□ 0.74
PDCD4Q53EL6 AC106739.1-201ENST00000617035 715 ntBASIC19.7■□□□□ 0.74
PDCD4Q53EL6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.7■□□□□ 0.74
PDCD4Q53EL6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.7■□□□□ 0.74
PDCD4Q53EL6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PDCD4Q53EL6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDCD4Q53EL6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PDCD4Q53EL6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDCD4Q53EL6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
PDCD4Q53EL6 RASA4CP-201ENST00000424092 1398 ntBASIC19.7■□□□□ 0.74
PDCD4Q53EL6 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PDCD4Q53EL6 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDCD4Q53EL6 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PDCD4Q53EL6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.69■□□□□ 0.74
PDCD4Q53EL6 AC092720.2-201ENST00000602388 1665 ntBASIC19.69■□□□□ 0.74
PDCD4Q53EL6 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 606.4 ms