Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CERKLQ49MI3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CERKLQ49MI3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CERKLQ49MI3 AC142381.4-202ENST00000563973 229 ntBASIC24.16■■□□□ 1.46
CERKLQ49MI3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CERKLQ49MI3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CERKLQ49MI3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.16■■□□□ 1.46
CERKLQ49MI3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.16■■□□□ 1.46
CERKLQ49MI3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.16■■□□□ 1.46
CERKLQ49MI3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
CERKLQ49MI3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
CERKLQ49MI3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
CERKLQ49MI3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC24.15■■□□□ 1.46
CERKLQ49MI3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.15■■□□□ 1.46
CERKLQ49MI3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CERKLQ49MI3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
CERKLQ49MI3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC24.15■■□□□ 1.46
CERKLQ49MI3 AL158047.1-201ENST00000445918 881 ntBASIC24.15■■□□□ 1.46
CERKLQ49MI3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC24.15■■□□□ 1.46
CERKLQ49MI3 C2orf69P4-201ENST00000565394 541 ntBASIC24.15■■□□□ 1.46
CERKLQ49MI3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC24.15■■□□□ 1.46
CERKLQ49MI3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.15■■□□□ 1.46
CERKLQ49MI3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CERKLQ49MI3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CERKLQ49MI3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.15■■□□□ 1.46
CERKLQ49MI3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
CERKLQ49MI3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CERKLQ49MI3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
CERKLQ49MI3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CERKLQ49MI3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CERKLQ49MI3 EP400NL-214ENST00000641289 2402 ntBASIC24.14■■□□□ 1.46
CERKLQ49MI3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CERKLQ49MI3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CERKLQ49MI3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CERKLQ49MI3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC24.14■■□□□ 1.45
CERKLQ49MI3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CERKLQ49MI3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC24.14■■□□□ 1.45
CERKLQ49MI3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CERKLQ49MI3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CERKLQ49MI3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CERKLQ49MI3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC24.14■■□□□ 1.45
CERKLQ49MI3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC24.13■■□□□ 1.45
CERKLQ49MI3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CERKLQ49MI3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC24.13■■□□□ 1.45
CERKLQ49MI3 FBXW4P1-201ENST00000426721 2239 ntBASIC24.13■■□□□ 1.45
CERKLQ49MI3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CERKLQ49MI3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CERKLQ49MI3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CERKLQ49MI3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CERKLQ49MI3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CERKLQ49MI3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CERKLQ49MI3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CERKLQ49MI3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC24.13■■□□□ 1.45
CERKLQ49MI3 PGM5P4-201ENST00000421970 445 ntBASIC24.13■■□□□ 1.45
CERKLQ49MI3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC24.13■■□□□ 1.45
CERKLQ49MI3 SLC29A4P2-201ENST00000504749 1089 ntBASIC24.13■■□□□ 1.45
CERKLQ49MI3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC24.13■■□□□ 1.45
CERKLQ49MI3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
CERKLQ49MI3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CERKLQ49MI3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
CERKLQ49MI3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
CERKLQ49MI3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CERKLQ49MI3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CERKLQ49MI3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
CERKLQ49MI3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CERKLQ49MI3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.12■■□□□ 1.45
CERKLQ49MI3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC24.12■■□□□ 1.45
CERKLQ49MI3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CERKLQ49MI3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC24.12■■□□□ 1.45
CERKLQ49MI3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CERKLQ49MI3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
CERKLQ49MI3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC24.12■■□□□ 1.45
CERKLQ49MI3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC24.12■■□□□ 1.45
CERKLQ49MI3 OR2A1-AS1-207ENST00000486094 819 ntBASIC24.12■■□□□ 1.45
CERKLQ49MI3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC24.12■■□□□ 1.45
CERKLQ49MI3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CERKLQ49MI3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC24.12■■□□□ 1.45
CERKLQ49MI3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
CERKLQ49MI3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CERKLQ49MI3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
CERKLQ49MI3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CERKLQ49MI3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CERKLQ49MI3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
CERKLQ49MI3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CERKLQ49MI3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24.11■■□□□ 1.45
CERKLQ49MI3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
CERKLQ49MI3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CERKLQ49MI3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
CERKLQ49MI3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC24.11■■□□□ 1.45
CERKLQ49MI3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC24.11■■□□□ 1.45
CERKLQ49MI3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC24.11■■□□□ 1.45
CERKLQ49MI3 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC24.11■■□□□ 1.45
CERKLQ49MI3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.11■■□□□ 1.45
CERKLQ49MI3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CERKLQ49MI3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CERKLQ49MI3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CERKLQ49MI3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.11■■□□□ 1.45
CERKLQ49MI3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CERKLQ49MI3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
CERKLQ49MI3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms