Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PRICKLE4Q2TBC4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.18■□□□□ 0.66
PRICKLE4Q2TBC4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PRICKLE4Q2TBC4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE4Q2TBC4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.18■□□□□ 0.66
PRICKLE4Q2TBC4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE4Q2TBC4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE4Q2TBC4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.18■□□□□ 0.66
PRICKLE4Q2TBC4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PRICKLE4Q2TBC4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PRICKLE4Q2TBC4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PRICKLE4Q2TBC4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRICKLE4Q2TBC4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PRICKLE4Q2TBC4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
PRICKLE4Q2TBC4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRICKLE4Q2TBC4 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.17■□□□□ 0.66
PRICKLE4Q2TBC4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.17■□□□□ 0.66
PRICKLE4Q2TBC4 RAP2CP1-201ENST00000605103 478 ntBASIC19.17■□□□□ 0.66
PRICKLE4Q2TBC4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRICKLE4Q2TBC4 FP700111.2-201ENST00000619190 1892 ntBASIC19.17■□□□□ 0.66
PRICKLE4Q2TBC4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRICKLE4Q2TBC4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PRICKLE4Q2TBC4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 CYP2T1P-201ENST00000432607 1285 ntBASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.16■□□□□ 0.66
PRICKLE4Q2TBC4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 RARRES2P4-201ENST00000514074 484 ntBASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 MIR2861-201ENST00000636310 90 ntBASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRICKLE4Q2TBC4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
PRICKLE4Q2TBC4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
PRICKLE4Q2TBC4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.14■□□□□ 0.66
PRICKLE4Q2TBC4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PRICKLE4Q2TBC4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRICKLE4Q2TBC4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRICKLE4Q2TBC4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRICKLE4Q2TBC4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRICKLE4Q2TBC4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRICKLE4Q2TBC4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.14■□□□□ 0.65
PRICKLE4Q2TBC4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.14■□□□□ 0.65
PRICKLE4Q2TBC4 AC026185.1-201ENST00000445748 174 ntBASIC19.14■□□□□ 0.65
PRICKLE4Q2TBC4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.14■□□□□ 0.65
PRICKLE4Q2TBC4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.14■□□□□ 0.65
PRICKLE4Q2TBC4 AC005181.1-201ENST00000604782 1256 ntBASIC19.14■□□□□ 0.65
PRICKLE4Q2TBC4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.14■□□□□ 0.65
PRICKLE4Q2TBC4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.14■□□□□ 0.65
PRICKLE4Q2TBC4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRICKLE4Q2TBC4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRICKLE4Q2TBC4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRICKLE4Q2TBC4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.14■□□□□ 0.65
PRICKLE4Q2TBC4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRICKLE4Q2TBC4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRICKLE4Q2TBC4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRICKLE4Q2TBC4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRICKLE4Q2TBC4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRICKLE4Q2TBC4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRICKLE4Q2TBC4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms