Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 PEP12YOR036W 867 nt2.7□□□□□ -1.98
VPS38Q05919 YPL034WYPL034W 498 nt2.7□□□□□ -1.98
VPS38Q05919 YBR209WYBR209W 318 nt2.7□□□□□ -1.98
VPS38Q05919 SSF1YHR066W 1362 nt2.7□□□□□ -1.98
VPS38Q05919 DUG2YBR281C 2637 nt2.7□□□□□ -1.98
VPS38Q05919 NUM1YDR150W 8247 nt2.69□□□□□ -1.98
VPS38Q05919 MET32YDR253C 576 nt2.69□□□□□ -1.98
VPS38Q05919 GPI19YDR437W 423 nt2.69□□□□□ -1.98
VPS38Q05919 YER079C-AYER079C-A 339 nt2.69□□□□□ -1.98
VPS38Q05919 YGL015CYGL015C 393 nt2.69□□□□□ -1.98
VPS38Q05919 OTU2YHL013C 924 nt2.69□□□□□ -1.98
VPS38Q05919 BET3YKR068C 582 nt2.69□□□□□ -1.98
VPS38Q05919 AFB1YLR040C 675 nt2.69□□□□□ -1.98
VPS38Q05919 YNR021WYNR021W 1215 nt2.69□□□□□ -1.98
VPS38Q05919 ESF2YNR054C 951 nt2.69□□□□□ -1.98
VPS38Q05919 GDI1YER136W 1356 nt2.69□□□□□ -1.98
VPS38Q05919 BI4Q0120 1917 nt2.69□□□□□ -1.98
VPS38Q05919 SVL3YPL032C 2478 nt2.69□□□□□ -1.98
VPS38Q05919 MLH1YMR167W 2310 nt2.69□□□□□ -1.98
VPS38Q05919 GEA1YJR031C 4227 nt2.69□□□□□ -1.98
VPS38Q05919 UBP16YPL072W 1500 nt2.68□□□□□ -1.98
VPS38Q05919 BNR1YIL159W 4128 nt2.68□□□□□ -1.98
VPS38Q05919 YHR032W-AYHR032W-A 180 nt2.68□□□□□ -1.98
VPS38Q05919 YLR154W-EYLR154W-E 204 nt2.68□□□□□ -1.98
VPS38Q05919 YLR302CYLR302C 363 nt2.68□□□□□ -1.98
VPS38Q05919 HHT2YNL031C 411 nt2.68□□□□□ -1.98
VPS38Q05919 YOR050CYOR050C 348 nt2.68□□□□□ -1.98
VPS38Q05919 SIN3YOL004W 4611 nt2.68□□□□□ -1.98
VPS38Q05919 STE11YLR362W 2154 nt2.67□□□□□ -1.98
VPS38Q05919 SSF2YDR312W 1362 nt2.67□□□□□ -1.98
VPS38Q05919 ADK1YDR226W 669 nt2.67□□□□□ -1.98
VPS38Q05919 RPS17BYDR447C 411 nt2.67□□□□□ -1.98
VPS38Q05919 PRM8YGL053W 714 nt2.67□□□□□ -1.98
VPS38Q05919 NOP19YGR251W 591 nt2.67□□□□□ -1.98
VPS38Q05919 CIC1YHR052W 1131 nt2.67□□□□□ -1.98
VPS38Q05919 COA4YLR218C 453 nt2.67□□□□□ -1.98
VPS38Q05919 VPS20YMR077C 666 nt2.67□□□□□ -1.98
VPS38Q05919 JID1YPR061C 906 nt2.67□□□□□ -1.98
VPS38Q05919 PUF4YGL014W 2667 nt2.67□□□□□ -1.98
VPS38Q05919 YIL082W-AYIL082W-A 4497 nt2.67□□□□□ -1.98
VPS38Q05919 FIR1YER032W 2631 nt2.66□□□□□ -1.98
VPS38Q05919 YCR081C-AYCR081C-A 237 nt2.66□□□□□ -1.98
VPS38Q05919 TIF35YDR429C 825 nt2.66□□□□□ -1.98
VPS38Q05919 SPO13YHR014W 876 nt2.66□□□□□ -1.98
VPS38Q05919 EAF6YJR082C 342 nt2.66□□□□□ -1.98
VPS38Q05919 VPS51YKR020W 495 nt2.66□□□□□ -1.98
VPS38Q05919 YLR456WYLR456W 615 nt2.66□□□□□ -1.98
VPS38Q05919 SAS2YMR127C 1017 nt2.66□□□□□ -1.98
VPS38Q05919 PHO80YOL001W 882 nt2.66□□□□□ -1.98
VPS38Q05919 ISU1YPL135W 498 nt2.66□□□□□ -1.98
VPS38Q05919 ARR2YPR200C 393 nt2.66□□□□□ -1.98
VPS38Q05919 SSN2YDR443C 4263 nt2.66□□□□□ -1.98
VPS38Q05919 PHR1YOR386W 1698 nt2.66□□□□□ -1.98
VPS38Q05919 YDR209CYDR209C 414 nt2.65□□□□□ -1.99
VPS38Q05919 YHC1YLR298C 696 nt2.65□□□□□ -1.99
VPS38Q05919 YMR194C-AYMR194C-A 225 nt2.65□□□□□ -1.99
VPS38Q05919 YNL046WYNL046W 519 nt2.65□□□□□ -1.99
VPS38Q05919 YPL276WYPL276W 438 nt2.65□□□□□ -1.99
VPS38Q05919 VPS13YLL040C 9435 nt2.65□□□□□ -1.99
VPS38Q05919 SPF1YEL031W 3648 nt2.64□□□□□ -1.99
VPS38Q05919 DNL4YOR005C 2835 nt2.64□□□□□ -1.99
VPS38Q05919 GCV2YMR189W 3105 nt2.64□□□□□ -1.99
VPS38Q05919 HNT1YDL125C 477 nt2.64□□□□□ -1.99
VPS38Q05919 YER189WYER189W 369 nt2.64□□□□□ -1.99
VPS38Q05919 RPL29YFR032C-A 180 nt2.64□□□□□ -1.99
VPS38Q05919 MPO1YGL010W 525 nt2.64□□□□□ -1.99
VPS38Q05919 YIL156W-BYIL156W-B 222 nt2.64□□□□□ -1.99
VPS38Q05919 ARV1YLR242C 966 nt2.64□□□□□ -1.99
VPS38Q05919 MRPL33YMR286W 261 nt2.64□□□□□ -1.99
VPS38Q05919 NSL1YPL233W 651 nt2.64□□□□□ -1.99
VPS38Q05919 YIL166CYIL166C 1629 nt2.64□□□□□ -1.99
VPS38Q05919 GCD10YNL062C 1437 nt2.63□□□□□ -1.99
VPS38Q05919 AHC2YCR082W 387 nt2.63□□□□□ -1.99
VPS38Q05919 snR76snR76 109 nt2.63□□□□□ -1.99
VPS38Q05919 RTS3YGR161C 792 nt2.63□□□□□ -1.99
VPS38Q05919 YGR290WYGR290W 444 nt2.63□□□□□ -1.99
VPS38Q05919 tW(CCA)G1tW(CCA)G1 72 nt2.63□□□□□ -1.99
VPS38Q05919 tW(CCA)G2tW(CCA)G2 72 nt2.63□□□□□ -1.99
VPS38Q05919 tW(CCA)JtW(CCA)J 72 nt2.63□□□□□ -1.99
VPS38Q05919 tW(CCA)KtW(CCA)K 72 nt2.63□□□□□ -1.99
VPS38Q05919 tW(CCA)MtW(CCA)M 72 nt2.63□□□□□ -1.99
VPS38Q05919 tW(CCA)PtW(CCA)P 72 nt2.63□□□□□ -1.99
VPS38Q05919 MBB1YJL199C 327 nt2.63□□□□□ -1.99
VPS38Q05919 FPR1YNL135C 345 nt2.63□□□□□ -1.99
VPS38Q05919 GPI17YDR434W 1605 nt2.63□□□□□ -1.99
VPS38Q05919 PHO91YNR013C 2685 nt2.62□□□□□ -1.99
VPS38Q05919 YDR199WYDR199W 366 nt2.62□□□□□ -1.99
VPS38Q05919 YER038W-AYER038W-A 381 nt2.62□□□□□ -1.99
VPS38Q05919 YKL044WYKL044W 321 nt2.62□□□□□ -1.99
VPS38Q05919 YKR051WYKR051W 1257 nt2.62□□□□□ -1.99
VPS38Q05919 LSM2YBL026W 288 nt2.62□□□□□ -1.99
VPS38Q05919 RGM1YMR182C 636 nt2.62□□□□□ -1.99
VPS38Q05919 KTI11YBL071W-A 249 nt2.62□□□□□ -1.99
VPS38Q05919 SWM2YNR004W 441 nt2.62□□□□□ -1.99
VPS38Q05919 MMS1YPR164W 4224 nt2.62□□□□□ -1.99
VPS38Q05919 FKS3YMR306W 5358 nt2.62□□□□□ -1.99
VPS38Q05919 TPS2YDR074W 2691 nt2.61□□□□□ -1.99
VPS38Q05919 SNU56YDR240C 1479 nt2.61□□□□□ -1.99
VPS38Q05919 TSA2YDR453C 591 nt2.61□□□□□ -1.99
VPS38Q05919 GLC7YER133W 939 nt2.61□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 28.5 ms